Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1772 ATGGCATTCACTGCTGCAGAATCCTCTTCTTCTTCTGGTTCAAAACCGCGATGGGAATACCAAGTCTTCTTGAGTTTCAGAGGGGAAGACACCCGCAGAGGATTTACCGATCATCTGTATGCTTCACTGCAACGAAGAGGAATGACGACGTTCCGGGATGATGCAGAATTAGCGAGAGGAGAAGTGATTTCCTCGAAACTCATCGGAGCAATCCAAGGGTCCATGTCTGCGATCGTCGTTCTCTCGCCAAACTATGCTTCTTCCACTTGGTGTTTGGATGAGCTCCGAGCGATCGTTGAGTGCCGGAAAAATTTCGGGCAAATGGTATTTCCGATCTTCCACGGGGTGGATCCTTCTGATGTAAGACACCAAAGGGGAGTGTTCGCTGAAGCTTTCAGAAAACATGAAGAAGGGTTTCAAGGGGACGATGGGAAGGTGCAACGATGGAGAGACGCCTTGAGAGAAGTTGCTGATATCTCTGGTTGGGACTCCAAGGATCGGCATGAAGCAGAACTCATTGAAAGCACTGTTGAAGCCATACAGAGAAAACTACAACCTAAATTGCCATCTTACATAGGTAACCTTGTTGGGATTGATTCAAAAGCGGAGGAAGTGAACTCACTACTAGGTATGGGTTCAGAGGGCGTTCGCTTTATTGGCATTTGGGGCATGGGTGGCATAGGTAAAACAACTATTGCTAGAGTAGTCTATGAAAGAATCCAAGGTGAATTTGAAGTTAGCTGCTTTCTTGAGAATATTAGAGAGGCTTCTGATACAAATGGCTTGGTTAATGTACAAAGACAACTTCTATCTCGTCTAAGAAGGATTGAAATTTATGATTTATTGCCAGAGGGATTAAAGGAAGTCAGGTGCCTGGAGATTCTTGATGCTAGTGGAACTGCTATGGAAGAACTACCTTCATCCATCTTTTATCTGGAAAATCTTAAAGTATTATCCTTTAATGGATGCAATGGGCCAGTATCCAAATCTGGAAGCTTACTTCTACCATTTCAGTGGTTATTTGGGAGTCGTCCTGTTTCCACGGGCTTCAGAATGTCTCCTATCTTGGGTCTATGCTCTTTGCAATATTTAAACTTGAGTAACTGCAATCTTTCCGAAGCATCATTTCCTAATAATATTGACTGCCTAGTGTCTTTGAGCAGTTTAAGTTTAAATGGGAACAATTTTATTAGCTTACCTAGCACTATTTCTAAACTGTCAAAGCTGCGAGGTCTCTGGTTAGATCATTGCCGGATGCTGCAATCTTTGCCTGAGCTGCCATCAGCTATAGAACTGTTATATGCAAGCAATTGTACTGCACTAGAAACATCCAGATTTGATCCATCGAGGCCGTGTAATCTCTTTGCAGCAACCAAATTGCGCTGTAATGATGCGAATCCATTTGTGGTAGTTGAAAGATTTCTTCAGGAAATTCCTAGTCCAAAGAAAAGATATCAGATGGTTATCCCAGGGAGTGAAATCCCATCATGGTTTGACCATCAAAATTCTCGTTTCTTTGTTACTGTACGACTTGATCATAGCCGGCCTTCATCTGAGTTGGTGGGATTTGCATTGTGTTTTGTGTTGGTAAATTATGTAAGCCCTGAGGTGTGTGAACATGAAGTCTGCACTTCTTTTGAGGATTCTGGATCTGGTTTGACTCAATGTCCCATTTTATTTGGGAACCCTAATTTGGAGCCATATCAACCTCACCTTTACGTTGCCTACTTCTCTGCTGATGAGAAACACGCGAGTAAATGGAGTCAAATTGAATTTTCACTCAAACCAGAATGCCGCTATGCTGGGTGTTATGGGTTGGAAGTAGTCAAGTGTGGGTGCCGTGTGGTGTATAAGAAAGATGTTGAAGACTTGAAGAGATCAGGAAACCATATGGAGAATTTGGGCTGCATATGA 1914 0.4295 MAFTAAESSSSSGSKPRWEYQVFLSFRGEDTRRGFTDHLYASLQRRGMTTFRDDAELARGEVISSKLIGAIQGSMSAIVVLSPNYASSTWCLDELRAIVECRKNFGQMVFPIFHGVDPSDVRHQRGVFAEAFRKHEEGFQGDDGKVQRWRDALREVADISGWDSKDRHEAELIESTVEAIQRKLQPKLPSYIGNLVGIDSKAEEVNSLLGMGSEGVRFIGIWGMGGIGKTTIARVVYERIQGEFEVSCFLENIREASDTNGLVNVQRQLLSRLRRIEIYDLLPEGLKEVRCLEILDASGTAMEELPSSIFYLENLKVLSFNGCNGPVSKSGSLLLPFQWLFGSRPVSTGFRMSPILGLCSLQYLNLSNCNLSEASFPNNIDCLVSLSSLSLNGNNFISLPSTISKLSKLRGLWLDHCRMLQSLPELPSAIELLYASNCTALETSRFDPSRPCNLFAATKLRCNDANPFVVVERFLQEIPSPKKRYQMVIPGSEIPSWFDHQNSRFFVTVRLDHSRPSSELVGFALCFVLVNYVSPEVCEHEVCTSFEDSGSGLTQCPILFGNPNLEPYQPHLYVAYFSADEKHASKWSQIEFSLKPECRYAGCYGLEVVKCGCRVVYKKDVEDLKRSGNHMENLGCI 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1772 637 SUPERFAMILY L domain-like 271 455 - -
Dere08g1772 637 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Dere08g1772 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 291 IPR027417 -
Dere08g1772 637 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Dere08g1772 637 Pfam TIR domain 20 190 IPR000157 GO:0007165
Dere08g1772 637 Gene3D - 12 183 IPR035897 -
Dere08g1772 637 Pfam NB-ARC domain 204 275 IPR002182 GO:0043531
Dere08g1772 637 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 291 441 IPR044974 GO:0006952
Dere08g1772 637 Pfam C-JID domain 489 622 IPR045344 -
Dere08g1772 637 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 162 IPR035897 -
Dere08g1772 637 SMART till_3 19 159 IPR000157 GO:0007165
Dere08g1772 637 Gene3D - 184 297 IPR027417 -
Dere08g1772 637 Gene3D Ribonuclease Inhibitor 346 447 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1772 Dere-ChrDere08 24727111 24732535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1772 19 296 WRKY Transcription Factor Family AT4G12020 29.514 4.64e-25 109