Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1758 ATGTCGAGTCCTCCGTCGCCGCCGTCGCATTTCTCAGAGTCACCGCCGTTGAATTCCGCCGCCAATGATCCCTCTCCGGAGGCAACGTCGTCGGCATCCTCCAGAGCCAAGCTCCTGAAAATGCCTCCGATTCCGAATCGGTGGACCACGATAGAGGAGGAAGGCGAGGAAAGCAATGAGGAGGAAGAAGGTAATAAAGCAGAGCAGGAGCTAACCGAAGATGATGCTTCATCGATTTTGCTTGCGTCATCTTTAGGGCTTAATCACATCCGTACACACTCAGCTCCTTCGCCTCGTGGGCTTCCGTCCTTGGTTGGTGCGCCTTCAAATTTGAGTAAGGATTCTGCTGATGATGGGACTAATGCCAATTCGAAAACCTCTCGTCAAAATATGGCTTCAACGGAAATAGGGAAACGAATGCATGGGAGTCAATGCAAATTGTCTAGAGCTCCTTCACATGTCCTTCCTGTGCTGCAGGGTAATCATGATACTTTTGCTAAAGAATTGCAGTCGCCCCGCTTTCAAGCAATACTGCGTGTCACAAGTGGGCGCAAGAAGAAGCACATTGATTTCAAAAGCTACTCTCATGAACTAAACTCAAAAGGGGTTAAAGCTTTTCCAGTTTGGAAACATCGTGCATTTGGGCATATGGAGGAGGTCATGGTGGCAATCAGAACTAAGTTTGGAAAGCTGAAGGGAGAAGTTGATTCTGACTTAAGTGCTTTTGCTGGAGATTTGGTGGGTATTCTTGAAAAAACTACAGACTCCCATCCTGAATGGAGAGAGAGCTTGGAGGATCTGTTAATTGTTGCCCAACGATGTGCAATGATGTCAACTGGTGACTTTTGGATCAAGGGTGAAGGCATTGTTCAGAATTTAGATGACAGGCGTCAAGAGTTACCGATGGGGGTCCTCAAGCAAGCTCATACACGCTTACTTTTTATTCTCACTCGATGCACTCGTCTTGTGCAATTCCAGAAAGAGAGTGGCTATGAACAAGATCACATTCTTGGTCTTCACCAACTCAGTGATCTTGGGTTTTATCCTGAGCAAATTTTGCAGGCTGTACAACAGCAATCCATTGTTCCACCAGGTGGAAATGAGATGGCTGATAAGCAGCAAACATCACATGGTAAAGAAGAAGAGAATCTGATAATAAATCAAAGTCAAGTTGACCAGCATGTGGGTGCTGCAACTGACAGTGTGGAGGCTAGCACTGCCAAAAGTATTGACTCAACTGCTAGCAGCTATAGAATGGCCTCTTGGAAAAAATTCCCAGTTCCTCCTGAGAAGAAGTGTAAACATAAAAGTCAGGATGCCGTAGATTTGCCATCCAAGGGCGAACTGGATCCGATTCAAGTCAAAGATGAAAATGCTGAAAATTTGGATACTCATTCAAGCAATCCTGAACATTCGGAGCCATCCTCCAGAACCCAAAAGGTAAGTTGGGGATTCTGGGGAGATCATCACAACCTAACCTATGAGAATTCAATGATCTGCAGAATTTGTGAGGTTGAAATACCAATCGTACATGTGGAGGAGCACTCTCAAATATGCACAATTGCTGATAGATGTGATTTGAAAGGCCTTACAGTAAATGAACGGCTTGAAAGAGTTGCTGAAACTATTGAAAAGATAATAGAATCAGGGACGCCAAAAAGCACACCGAAAAGCACTGATGGTCCTGGAGAAAGTTTTGAGTTTGTGAGAGTGTCTACGTCAAGTGTGCATGATGAGTTCAATGATTTATCTCTTGAGAGAAACAGCTTATCTCATAGATGCTCAGATGACATGCTTGACTCTGCTGCTGAAGCTGACAATACTTTTGTTAAGGATGATTTGAACTATTTGCCAAAAATATCATGTGAAACACATTCCTGCTTCAAACCTGAGCATGGCACAAAGATGTCTTCAGTTGGAAGCATGACACCAAGATCACCATTATTAACACCACGAACAAGTCAGATAGAAATGTTATTAAGCGGACGAAGAACAATATTGGAACTTGAGAATTATGGCCAGATAAACAAGCTAGTAGAAATTGCTCGTTCTGTTGCAGACGTGAACAATTGTGATTACAGTGCTTTGGAGCATATGGTTGATCGGTTAGAAGACCTTAAATACACAATTCAGGACAGAAAGGTGGATGCTCTTGTTGTAGAGACTTTTGGACGACGCATAGAGAAACTTTTGCAGGAGAAATATATATATCTTTGTGGGCATATAGAAGATGAAAAGCTGGACTCATCGAATGGTTTGATTGAAGAAGAGAGTTCAGTGGAAGATGATACTATCCGTAGCCTTCGTGCTAGCCCAATTAATCATTGTTCTAAGGATCGAACCTCCATTGAAGACTTTGAAATAATAAGGCCAATAAGCCGGGGTGCATATGGACGAGTTTTCCTTACCCGAAAAAGAGCAACTGGTGATTTATTTGCTATAAAGGTTTTGAAAAAGGCTGATATGATTCGGAAAAATGCTGTTGAAAGTATTTTGGCAGAGCGAGACATCCTTATATCAGTTCGAAATCCCTTTGTGGTTCGATTTTTCTACTCTTTCACTTGTAGGGAAAATCTTTACCTGGTTATGGAATTTTTAAATGGTGGAGACCTTTATTCTCTACTAAGAAATTTAGGTTGCTTAGATGAAGACATGGCACGTGTGCTTGCATTGGAGTATTTGCATTCCTTACATGTAATTCACAGAGACTTGAAGCCTGATAACTTATTGATCGGTCAAGATGGTCACATCAAGTTGACAGATTTTGGGCTCTCCAAAGTTGGCCTTATCGACAGCACGAATGACTTATCAGCTCCGTCATTTTCTACTAATGGTTTCCTAGGAGATGATGAACCAAAAAAACAACATTCTTCAAAACTGGAACAACGTCAAAAGCATTCAGTAGTTGGCACCCCAGATTATTTGGCACCTGAAATACTTCTGGGCATGGGACATGGTACAACTGCAGATTGGTGGTCTGTGGGTGTTATATTGTATGAGCTACTTGTGGGCATTCCACCATTCAATGCTGAACATCCACAGCAAATCTTTGATAACATAATCAACAGAGACATACAGTGGCCCAAGATACCTGAAGAGATGAGCTATGATGCATACGATTTGATTGACAAATTACTCACTGAAAATCCAGTCCAAAGATTAGGAGCAACAGGTGCTAGTGAGGTTAAAAGGCACCCTTTCTTTAAGGATATCAATTGGGATACCCTTGCAAGACAGAAGGCCATGTTCATACCATCAGCTGAAACTCATGACACTAGTTATTTCATGAGCCGGTACATATGGAACCCAGAAGATGAACATCTCACTGGAGGTAGCGACTTTGATGACCTGACTGACTCTTGCTGCAGTGGTTCAGGCAGCGACTTAGTAGATGAAGACGGAGATGAATGTGGTAGTTTAGCAGACTTTGGTGGACCAACTCTTGAAGTGCAGTACTCATTTAGTAATTTCTCATTTAAGAACTTGTCTCAGCTAGCATCTATCAATTATGATCTGGTGATTAAGAACTCCAAAGAATCAGCCGATGACCCCAAACCATCTGTTTCGTGA 3570 0.4252 MSSPPSPPSHFSESPPLNSAANDPSPEATSSASSRAKLLKMPPIPNRWTTIEEEGEESNEEEEGNKAEQELTEDDASSILLASSLGLNHIRTHSAPSPRGLPSLVGAPSNLSKDSADDGTNANSKTSRQNMASTEIGKRMHGSQCKLSRAPSHVLPVLQGNHDTFAKELQSPRFQAILRVTSGRKKKHIDFKSYSHELNSKGVKAFPVWKHRAFGHMEEVMVAIRTKFGKLKGEVDSDLSAFAGDLVGILEKTTDSHPEWRESLEDLLIVAQRCAMMSTGDFWIKGEGIVQNLDDRRQELPMGVLKQAHTRLLFILTRCTRLVQFQKESGYEQDHILGLHQLSDLGFYPEQILQAVQQQSIVPPGGNEMADKQQTSHGKEEENLIINQSQVDQHVGAATDSVEASTAKSIDSTASSYRMASWKKFPVPPEKKCKHKSQDAVDLPSKGELDPIQVKDENAENLDTHSSNPEHSEPSSRTQKVSWGFWGDHHNLTYENSMICRICEVEIPIVHVEEHSQICTIADRCDLKGLTVNERLERVAETIEKIIESGTPKSTPKSTDGPGESFEFVRVSTSSVHDEFNDLSLERNSLSHRCSDDMLDSAAEADNTFVKDDLNYLPKISCETHSCFKPEHGTKMSSVGSMTPRSPLLTPRTSQIEMLLSGRRTILELENYGQINKLVEIARSVADVNNCDYSALEHMVDRLEDLKYTIQDRKVDALVVETFGRRIEKLLQEKYIYLCGHIEDEKLDSSNGLIEEESSVEDDTIRSLRASPINHCSKDRTSIEDFEIIRPISRGAYGRVFLTRKRATGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEFLNGGDLYSLLRNLGCLDEDMARVLALEYLHSLHVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIDSTNDLSAPSFSTNGFLGDDEPKKQHSSKLEQRQKHSVVGTPDYLAPEILLGMGHGTTADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIQWPKIPEEMSYDAYDLIDKLLTENPVQRLGATGASEVKRHPFFKDINWDTLARQKAMFIPSAETHDTSYFMSRYIWNPEDEHLTGGSDFDDLTDSCCSGSGSDLVDEDGDECGSLADFGGPTLEVQYSFSNFSFKNLSQLASINYDLVIKNSKESADDPKPSVS 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1758 1189 Gene3D Phosphorylase Kinase; domain 1 784 1095 - -
Dere08g1758 1189 MobiDBLite consensus disorder prediction 1 73 - -
Dere08g1758 1189 MobiDBLite consensus disorder prediction 949 963 - -
Dere08g1758 1189 CDD STKc_MAST_like 792 1073 - -
Dere08g1758 1189 MobiDBLite consensus disorder prediction 428 452 - -
Dere08g1758 1189 MobiDBLite consensus disorder prediction 946 967 - -
Dere08g1758 1189 FunFam probable serine/threonine protein kinase IREH1 784 873 - -
Dere08g1758 1189 MobiDBLite consensus disorder prediction 90 148 - -
Dere08g1758 1189 MobiDBLite consensus disorder prediction 13 36 - -
Dere08g1758 1189 MobiDBLite consensus disorder prediction 108 137 - -
Dere08g1758 1189 FunFam Serine/threonine protein kinase 15 959 1086 - -
Dere08g1758 1189 SMART serkin_6 786 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1758 1189 PANTHER SERINE/THREONINE-PROTEIN KINASE 474 1124 - -
Dere08g1758 1189 ProSiteProfiles Protein kinase domain profile. 786 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1758 1189 Gene3D Transferase(Phosphotransferase) domain 1 870 1086 - -
Dere08g1758 1189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 899 911 IPR008271 GO:0004672|GO:0006468
Dere08g1758 1189 Pfam Protein kinase domain 787 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1758 1189 MobiDBLite consensus disorder prediction 54 69 - -
Dere08g1758 1189 SUPERFAMILY Protein kinase-like (PK-like) 783 1096 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1758 Dere-ChrDere08 24428359 24453641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1758 36 1182 AGC Kinase Gene Family AT5G62310 62.777 0.0 1425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Dere08g1758 Pkinase 2.3e-58 CL0016