Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1753 ATGATCACAACCTCAATCTCTTGTTCTCCTCACAACAATCTCTTATCAATCCTTCTTGCTTTCTTATTCATCATCTCAACCCTCCACACATCCTTCGCTGCTTCATCCAACACCACCAATTCCCCCAAAACCTACAAATCATTCATAAAAGGGTATTGCAGTTCTACCACTCACCCCAAAGAGTGCTACAAGTATCTCTCCCCTTATGCCTCCGTTATTAAAACAAGCCCTCTAGTTCTCACTAAGAGCTCCATTTATCTTGCTCTGAAAGCAACAAGGGATGCTTCTTCTGTACTCAAAAAGCTGTCCAAGCTCAAGGATCTCTCCCACGGCGAAACCCTAGTCATCAAGGACTGTCTAGAGAACGTCGTTGATTCATACGAGGAGGTCAAGCAATCAGCGGTGGCCGTCAAAGGCTTGAACGGTACGAACACCGATGAGGAGTCATTCCAATGGGACAGCATAAAGACATGGATGAGTGCAGCCATCACAGATGGCACCACCTGCACCGACGAGTTTGATGAGATGGAGGTCAGGGCTAAGTTGCAGAAGAAGATCAGAAGCAGCGTCACGAAAGTGAATGACATGGTCAGCACTGCTCTCGCCCTCGTCAACAAGTTCACGTACTACTGA 633 0.4692 MITTSISCSPHNNLLSILLAFLFIISTLHTSFAASSNTTNSPKTYKSFIKGYCSSTTHPKECYKYLSPYASVIKTSPLVLTKSSIYLALKATRDASSVLKKLSKLKDLSHGETLVIKDCLENVVDSYEEVKQSAVAVKGLNGTNTDEESFQWDSIKTWMSAAITDGTTCTDEFDEMEVRAKLQKKIRSSVTKVNDMVSTALALVNKFTYY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1753 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 18 203 - -
Dere08g1753 210 SMART PMEI_2 44 203 IPR006501 GO:0004857
Dere08g1753 210 Pfam Plant invertase/pectin methylesterase inhibitor 47 203 IPR006501 GO:0004857
Dere08g1753 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 207 IPR035513 -
Dere08g1753 210 CDD PMEI-like_3 53 208 - -
Dere08g1753 210 NCBIfam pectinesterase inhibitor domain 18 206 IPR006501 GO:0004857
Dere08g1753 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 208 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1753 Dere-ChrDere08 24361445 24362077 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1753 44 208 Carbohydrate Esterase AT1G53830 30.357 1.78e-12 63.9