Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1747 ATGGGTAGGCTATTATTCTTCTTAAGTCTCAGTATTCTATTCCTTTGTGTTCTTCCAACAGCCACATCAAGAAGATCATCTTCAAGATCAAGAAGACCTTCTTCCTCTAGCAACATTGAATGGTGGTGCAACCAAACCCCACACCCAGGTCCATGCAGATACTTCATGAGCCATACGCACCACCATGGCTTCGGACCCAAGCACAAGTCGAAGTTCCGAGGCATGCTGGTTCAGATAGCCTTGGACCAAGCTCAACACATGCAATACGAAACTCGAGCCTATGCAGAAAAAAGCGTCACCAAGAAGCAAAAAGCTGTGACCAGTGATTGCTTGAAGCTCTACGACAACACCATCTTCCAGTTGAACCGAACCATCCTAGGGCTCACAGCCAGGTCGAAACGACGTCGTTGCTCCGTCCTCGACGCCCAAACTTGGCTCAGCACAGCCCTCACCAACATGCAGACCTGCAAGAATGGAGCTTCAGACTTAAGGGTTAATATGTCTCACTTTATAGCGTCCAGTAACATGTGCTTCAATGTCTCCAAGATGATAAGCAATAGCTTAGCGATAAACGCTGCGTTTTTGAAAAGACCCAAGATAGATTATCACAAGGATAAAAATGGGACGTCGGAGGAGTCTGAATTTCCGAGGTGGTTTACGAGACGTGAGAGGAGGCTAGTGACGACGTCGACGGCGGCGATAAAGGCGAATCTCGTGGTGGCGAAGGATGGCTCAGGGCACTTCAAGACGGTGCAGGCTGCCTTAAACGCGGCGGCGAAGAGAAGCAGAAAGACTAGGTTTGTGATAAGAGTGAAGAAAGGGATTTACAGAGAGAACATCGAGGTGGATAAGAACAACGATAATATAATGCTTGTTGGTGATGGCATGAGATACACTGTAATAACGGGTTCGAAGAGCGTTAAAGATGGCATTACCACGTATAGCTCTGCAACTGCAGGTATAGATGGGATTGGCTTCATTGCACGAGACATAACCTTTCAGAACACTGCTGGTCCTTACAAGGGACAAGCGGTGGCACTCCGATCAGCCTCCGACCTCTCAGTATTTTACCGGTGTGCCATTGTAGGGTACCAAGACACCCTCATGGTTTATGCACAGCGTCAATTTTACAGGGAATGCTACATCTACGGCACCGTAGACTTCATCTTCGGCAATGCTGCAGTAGTTTTTCAGAAGTGCATGATTCTTGTCAGGAGGCCGTTATCGGGGCAAGCGAACATGATCACAGCCCAAGGTCGAGGAGACCCATACCAAAACACAGGGATCTCAATCCATAATTCTCAAATTCGAGCCGCGTCAGACCTCAAGCCGGTGGTGAGCTCATACACAACCTACTTGGGCCGGCCTTGGCAGCAATACTCTAGGGTTGTGATAATGAAGTCCTACATAGACTCCTTGGTAAGCCCATTGGGCTGGTCTCCATGGGGAAACACTACTTTTGCTTTGAACACACTTTATTTTGGGGAATACAAAAACTTTGGACCTCGATCATCCACAAGTAACAGGGTCAAATGGCCAGGATTTCATGCCATAACAAGCTCAAGTGAGGCATCTAGCTTCACTGTGAATAGCCTCCTTGCTGGCCGTACATGGTTGCCTTCAACTGGAGTGCCTTTTACTTCTGGTTTATAG 1653 0.4785 MGRLLFFLSLSILFLCVLPTATSRRSSSRSRRPSSSSNIEWWCNQTPHPGPCRYFMSHTHHHGFGPKHKSKFRGMLVQIALDQAQHMQYETRAYAEKSVTKKQKAVTSDCLKLYDNTIFQLNRTILGLTARSKRRRCSVLDAQTWLSTALTNMQTCKNGASDLRVNMSHFIASSNMCFNVSKMISNSLAINAAFLKRPKIDYHKDKNGTSEESEFPRWFTRRERRLVTTSTAAIKANLVVAKDGSGHFKTVQAALNAAAKRSRKTRFVIRVKKGIYRENIEVDKNNDNIMLVGDGMRYTVITGSKSVKDGITTYSSATAGIDGIGFIARDITFQNTAGPYKGQAVALRSASDLSVFYRCAIVGYQDTLMVYAQRQFYRECYIYGTVDFIFGNAAVVFQKCMILVRRPLSGQANMITAQGRGDPYQNTGISIHNSQIRAASDLKPVVSSYTTYLGRPWQQYSRVVIMKSYIDSLVSPLGWSPWGNTTFALNTLYFGEYKNFGPRSSTSNRVKWPGFHAITSSSEASSFTVNSLLAGRTWLPSTGVPFTSGL 550
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1747 550 Gene3D - 231 550 IPR012334 -
Dere08g1747 550 FunFam Pectinesterase 231 550 - -
Dere08g1747 550 SMART PMEI_2 34 190 IPR006501 GO:0004857
Dere08g1747 550 NCBIfam pectinesterase inhibitor domain 9 191 IPR006501 GO:0004857
Dere08g1747 550 CDD PMEI-like_3 41 196 - -
Dere08g1747 550 ProSitePatterns Pectinesterase signature 2. 382 391 IPR033131 -
Dere08g1747 550 PANTHER PECTINESTERASE 12 540 - -
Dere08g1747 550 Pfam Plant invertase/pectin methylesterase inhibitor 38 190 IPR006501 GO:0004857
Dere08g1747 550 SUPERFAMILY Pectin lyase-like 231 549 IPR011050 -
Dere08g1747 550 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 194 IPR035513 -
Dere08g1747 550 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 194 IPR035513 -
Dere08g1747 550 Pfam Pectinesterase 237 535 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere08g1747 Dere-ChrDere08 24238749 24241403 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1747 35 550 Carbohydrate Esterase AT5G51500 58.846 0.0 614