Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1731 ATGGACCTGAAGTCAAATCATACTCCTGTTCTTACTGATGCTGCACCTATAACAAAATCAAGACTGGGTGTGCATTCCAGTCTGTTGCCTTATTCTCCTACAGGGGCAGCTTTTCCACATGGTCTGTTTCTGACAATCCCAAGAAAGAAGACAGGAATTCTTGAAGATGTTCGTTGTAGTGGTTGGCTAGATGCCATGAAATCATCTTCTCCAACGGCCAAAAAGATAACAAAGGATATTAATCATGGCTTTGCTTCATCTGACACTGATAGTGCTGACTGTACCTGGCTGCTAAAGTATCCTTCAGCACTTAAATCTTTTGATCAAATTACAAACTACGCAAAAGGAAAGAGAATAGCATTGTTTCTGGATTATGATGGAACTCTTTCACCAATTGTGGATAATCCTGACTGTGCTTTCATGTCTGACAATATGCGTGATGCTGTTAAAAAAGTGGCAGAACTTTTTCCTACCGCAATAATTAGCGGAAGAAGCCGTGACAAGGTATATGAATTTGTTGGACTAACAGAACTCTATTATGCTGGTAGTCATGGGATGGACATTATTGGTCCTGTCAGACAATCTGTATCTGATAACCATCCTAATTGCATTAGGTCTACTGGCAATCAGGGCAAGGAAGTTAATTTATTCCAACCTGCTGCTGAATTCTTGCCAATGATTGATGAGGTGCTTAGGTCCCTTATTGAATGTACAAAAGACATTAAAGGAGCAAAAGTTGAGAACAATAAATTTTGTGTCTCTGTACACTACCGCAATGTGGATGAGAAGAGTTGGGATACAGTGGGGCAACGAGTGCATGATATTCTGAAAAACTACCCACGTTTGCGATTAACCCATGGGCGCAAGGTTTTAGAGGTCCGACCAGTGATCAATTGGGATAAGGGGAAAGCTGTCACATTTCTGCTTGAATCACTTGGACTTAGCAACTGTGATGATGTGCTTCCTATATATGTTGGAGACGATCGGACTGATGAAGATGCATTTAAGGTTTTAAGAGAGGGAAATAGAGGTTATGGCATCTTAGTTGCTTCTGCACCCAAGGAAAGCAATGCAGTCTACTCTCTTCGCGATCCATTAGAGGTCATGGAATTTCTCAAGTCACTTGCGGTTTGGAAGTCAAGCCTCCTTAAAAGCTTCATATAG 1164 0.4124 MDLKSNHTPVLTDAAPITKSRLGVHSSLLPYSPTGAAFPHGLFLTIPRKKTGILEDVRCSGWLDAMKSSSPTAKKITKDINHGFASSDTDSADCTWLLKYPSALKSFDQITNYAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRDAVKKVAELFPTAIISGRSRDKVYEFVGLTELYYAGSHGMDIIGPVRQSVSDNHPNCIRSTGNQGKEVNLFQPAAEFLPMIDEVLRSLIECTKDIKGAKVENNKFCVSVHYRNVDEKSWDTVGQRVHDILKNYPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLSNCDDVLPIYVGDDRTDEDAFKVLREGNRGYGILVASAPKESNAVYSLRDPLEVMEFLKSLAVWKSSLLKSFI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1731 387 Pfam Trehalose-phosphatase 122 365 IPR003337 GO:0003824|GO:0005992
Dere08g1731 387 CDD HAD_TPP 120 370 - -
Dere08g1731 387 NCBIfam trehalose-phosphatase 116 376 IPR003337 GO:0003824|GO:0005992
Dere08g1731 387 Gene3D - 218 384 IPR023214 -
Dere08g1731 387 Gene3D - 119 214 IPR023214 -
Dere08g1731 387 NCBIfam HAD-IIB family hydrolase 121 339 IPR006379 -
Dere08g1731 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 381 IPR044651 GO:0004805|GO:0005992
Dere08g1731 387 FunFam Trehalose 6-phosphate phosphatase 119 207 - -
Dere08g1731 387 SUPERFAMILY HAD-like 120 377 IPR036412 -
Dere08g1731 387 FunFam Trehalose 6-phosphate phosphatase 226 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1731 Dere-ChrDere08 23791669 23794605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1731 113 376 Trehalose Biosynthesis Gene Families AT1G70290 26.761 3.72e-12 66.2