Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1707 ATGAAAACTTTTCTTCTCTTTCTCACCTTCTCCTTCTTTTGCCAAATATACCTAGTTTTCTCTGCTTCTTCAACCCTGCCTCTACAAGTCATCTCTCTGCTTTCACTCAAAGCTTCCTTCATAGACCCATTCAAGACCCTCCATGACTGGGACCCTTCCTCAACTTTCTCCAATTCTAATTTCCAAGACCCAGTTTGGTGTTCATGGTCAGGTATCACATGCAATTCAAAAACAGCTCAAATCACCTCCATTGACCTCTCTCATCGCAACCTTTCAGGCATAATTTCACCTGAAATAAGGTTCTTGACCACCTTAAACCACTTAAATCTAAGTGGGAATGACTTCAGTGGAACTTTCCAGGCAGCAATTTATGAACTCACTGAGCTGAGGACTCTAGACATCAGCCACAATTCCTTCAACTCAACTTTCCCACCGGGCATTTCGAAGCTCAAGTTCTTGACAATTTTCAATGCTTACAGCAACAACTTCAGTGGCCCTTTACCTCAAGAATTCATCAGACTCAGGTTTCTTGAGCAGCTTAACCTTGGTGGGAGTTACTTCAGCGACAGGATTCCTTCAAGTTATCGCAGTTTCCCAAGATTAAAGTTCCTTTATCTGGCTGGAAATGCGTTGGAAGGTCCAATACCACCTCAGTTAGGCTTCTTATCACAGCTTGAACGCTTGGAGATCGGATACAACCAGTTTTCCGGAGGAATACCAGTAGAATTGACTTCATTGTTTAATCTTAAATACTTAGATATCTCTTCTGCTAATCTTTCTGGCTCTGTGATTCCAGAACTGGGAAACTTGACAATGCTGGAAACATTACTGTTGTTCAGGAATCGGTTCACTGGTGAAATCCCATCAAGCTTAGGCAATTTGAAAGTTCTCAAGGCTCTTGATTTGTCAGATAATGAGCTCACGGGTTCTATCCCTGCAGAAGTTACAATGTTGAAGGAACTCAGCATTTTGAGCTTAATGGACAACAAGCTGACAGGTGAAATACCACAAGGGATTGGTGAACTTCCCAACCTCGCCACTCTGCATCTATGGAACAATTCTATTACTGGGATTCTCCCACCAGCGCTTGGCTCGAATGGGTTACTCCAGAAACTGGATGTGTCCACTAATTCACTAACAGGTCCTATCCCCGCAGATGTTTGCAATGGAAACAAGCTCATCAAGCTCATCCTTTTCCGCAACAAATTTCATAGTGCACTTCCAGCATCGCTCGTGAACTGTACCTCACTAACAAGGCTTAGAATGCAAAACAACTATCTCAACGGTTCAATTCCATTCGGTTTTGGTCTCCTCCCGAACTTGACGTACGTTGATATGAGCAACAACGACTTCGTAGGTCCAATTCCTAAAGATTTTGGCAATGCTGTTAAAATACAGTACTTGAACATCTCTGGTAATTCCTTTGAGAGTCCATTACCCGATAACATCTGGAACGCTTCCAATCTACAGATTTTCTCGGCAAGTTCATCGAGAATCATCGGCGAAATCCCTGATTTCATCGGGTGCCAGAACATCTACAAAATCGAATTACACGGAAATTCTCTGAATGGTACCATCCCTTGGGAAATTGGCCACTGCGAGAAGCTCATTCTACTGAATCTGAGCCGCAATTCCCTCACGGGTATAATCCCTTGGGAAATCTCTGCTCTTCCATTTATCACCGACGTCGATCTCTCACACAATTTCCTCACTGGTACCATACCCTCCAATTTCAACAATTGCACCACCCTAGAAAACTTCAATGTCAGTTACAACCTACTCACCGGACCAATTCCCTCGTCGGGATCGACCTTCCACCCGTCGTCATTCTCCGGCAACGTCGGCCTCTGCGGCGGAGTTCTTGCAAAGCCGTGTGCCGCGGACGCCCTTGCCGCCGCGAACAGCGACATCGAGCTGCACAACAAACAGCAGCCGAAAAGAACCGCCGGTGCGATCGTGTGGATCGTCGCGGCGGCGTTTGGGATCGGCCTATTCGCGCTCGTTGCCGGAACCCGATGCTTCCGCGCAAACTACGGCGGTGCCTTTGGCGGCGGCGACGACCGCCGCGAGGTCGGGCCGTGGAAACTGACGGCGTTCCAGCGTTTGAACTTCACGGCGGAGGACGTGATAGAGTGCTTATCGATGTCCAATAAGATCATAGGGATGTGGTCCACAGGAACTGTGTACAAGGCGGAGATGCCAGGTGGCGAGATCGTGGCTGTCAAGAAGCTGTGGGGGAAGCATAAGGAGAACAGCAACATCATCCGACGGCGGAGAGGGGTTCTAGCGGAGGTTGAAGTGTTGGGGAACGTGAGGCATAGGAACATAGTGAGATTGTTAGGGTGTTGCAGCAACAGGGAGTGTACGATGCTGCTCTACGAGTACATGCCCAATGGGAATTTAGATGATTTATTGCATGGAAAAAATAAGGGAAATAATAATAGTAATGTGGTCGCTGATTGGCTAACGAGGTACAAGATAGCCTTGGGTGTGGCTCAGGGGATTTGCTATCTTCACCATGACTGTGAACCGGTGATCGTGCACCGCGATCTCAAGCCAAGTAATATATTATTGGACGGTGAGATGGAAGCCAGAGTGGCAGATTTTGGTGTGGCTAAGTTGATTCAGAGTGATGAATCCATGTCTGTCATTGCTGGATCCTACGGCTACATAGCACCAGAATATGCTTACACCCTACAAGTTGATGAGAAGAGTGATATTTACAGCTATGGAGTGGTGCTAATGGAGATTTTAACAGGAAAAAGGTCAGTGGACGCAGAGTTTGGTGATGGGAATAGTGTTGTGGATTGGGTTAGGTCTAAGATCAAGACTAAAGACGCCATTGATGAGATACTAGATAAGACTGTTGGGGCGGAGTGTGAGTCGGTGAAGGAGGAGATGATACAAATGCTTAGGATTGCCTTGCTTTGCACTAGTCGAAATCCCGTGGATCGACCTTCTATGAGAGATGTTTTGCTGATGCTACTAGAGGCTAGACCAAAGAGAAAACTGCTCCACAGCGTGGTAAGCACACACTGTGTTGCCAGTGATAATGCAGGTGCTGATGGTGGTGACAGTGGTCGTAGTGGTGGTGGTGGTGGTGGTGGTGATATTCTTTTAGCGTGCCAAAGTTTGTCGGGAAAATTAGGTTAG 3153 0.4678 MKTFLLFLTFSFFCQIYLVFSASSTLPLQVISLLSLKASFIDPFKTLHDWDPSSTFSNSNFQDPVWCSWSGITCNSKTAQITSIDLSHRNLSGIISPEIRFLTTLNHLNLSGNDFSGTFQAAIYELTELRTLDISHNSFNSTFPPGISKLKFLTIFNAYSNNFSGPLPQEFIRLRFLEQLNLGGSYFSDRIPSSYRSFPRLKFLYLAGNALEGPIPPQLGFLSQLERLEIGYNQFSGGIPVELTSLFNLKYLDISSANLSGSVIPELGNLTMLETLLLFRNRFTGEIPSSLGNLKVLKALDLSDNELTGSIPAEVTMLKELSILSLMDNKLTGEIPQGIGELPNLATLHLWNNSITGILPPALGSNGLLQKLDVSTNSLTGPIPADVCNGNKLIKLILFRNKFHSALPASLVNCTSLTRLRMQNNYLNGSIPFGFGLLPNLTYVDMSNNDFVGPIPKDFGNAVKIQYLNISGNSFESPLPDNIWNASNLQIFSASSSRIIGEIPDFIGCQNIYKIELHGNSLNGTIPWEIGHCEKLILLNLSRNSLTGIIPWEISALPFITDVDLSHNFLTGTIPSNFNNCTTLENFNVSYNLLTGPIPSSGSTFHPSSFSGNVGLCGGVLAKPCAADALAAANSDIELHNKQQPKRTAGAIVWIVAAAFGIGLFALVAGTRCFRANYGGAFGGGDDRREVGPWKLTAFQRLNFTAEDVIECLSMSNKIIGMWSTGTVYKAEMPGGEIVAVKKLWGKHKENSNIIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKGNNNSNVVADWLTRYKIALGVAQGICYLHHDCEPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILTGKRSVDAEFGDGNSVVDWVRSKIKTKDAIDEILDKTVGAECESVKEEMIQMLRIALLCTSRNPVDRPSMRDVLLMLLEARPKRKLLHSVVSTHCVASDNAGADGGDSGRSGGGGGGGDILLACQSLSGKLG 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1707 1050 Gene3D Phosphorylase Kinase; domain 1 695 795 - -
Dere08g1707 1050 SMART LRR_typ_2 270 294 IPR003591 -
Dere08g1707 1050 SMART LRR_typ_2 126 150 IPR003591 -
Dere08g1707 1050 SMART LRR_typ_2 198 222 IPR003591 -
Dere08g1707 1050 SMART LRR_typ_2 342 365 IPR003591 -
Dere08g1707 1050 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 243 995 - -
Dere08g1707 1050 FunFam leucine-rich repeat receptor-like protein kinase TDR 796 1007 - -
Dere08g1707 1050 Gene3D Ribonuclease Inhibitor 361 455 IPR032675 -
Dere08g1707 1050 SUPERFAMILY L domain-like 355 600 - -
Dere08g1707 1050 Gene3D Ribonuclease Inhibitor 29 182 IPR032675 -
Dere08g1707 1050 SMART serkin_6 714 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1707 1050 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Dere08g1707 1050 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 216 311 - -
Dere08g1707 1050 SUPERFAMILY Protein kinase-like (PK-like) 718 995 IPR011009 -
Dere08g1707 1050 ProSiteProfiles Protein kinase domain profile. 714 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1707 1050 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 685 795 - -
Dere08g1707 1050 Pfam Protein kinase domain 717 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1707 1050 Pfam Leucine Rich Repeat 535 557 IPR001611 GO:0005515
Dere08g1707 1050 SUPERFAMILY L domain-like 51 404 - -
Dere08g1707 1050 FunFam Leucine-rich repeat receptor-like protein kinase TDR 315 627 - -
Dere08g1707 1050 Gene3D Ribonuclease Inhibitor 509 627 IPR032675 -
Dere08g1707 1050 Pfam Leucine rich repeat N-terminal domain 29 75 IPR013210 -
Dere08g1707 1050 Gene3D Ribonuclease Inhibitor 183 360 IPR032675 -
Dere08g1707 1050 FunFam Leucine-rich repeat receptor-like protein kinase 29 191 - -
Dere08g1707 1050 Gene3D Transferase(Phosphotransferase) domain 1 796 1014 - -
Dere08g1707 1050 Gene3D Ribonuclease Inhibitor 456 508 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1707 Dere-ChrDere08 23171605 23175875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1707 6 1003 Receptor kinase-like Gene Family AT1G08590 42.690 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere08g1707 Pkinase 8.3e-46 CL0016