Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1702 ATGGCTCCTTCTTCCCTCACTTCTCGCTTTCAAGAATCTGTCACCAGACATGCACTTCGAGCCTACCTTGCAGAGTTCATCTCCACTTTCTTCTACGTCTTCGCCGTCATCGGTTCCGTCATGTCTTCCAGGAAGTTGGTGCCTGATGCTGCATTGGACCCAGCAAGTCTGGCTGTGGTAGCCATAGCAAATACCCTTGCTTTGTCCTCAGTGATGTTTGTGGCATGGGACACTTCTGGAGGACATGTGAACCCTGCAGTGACCTTTGGAAGGGTAGTTGGAGGCCACATCAGTGTTTCCACTGCCATCTTTTATTGGCTTGCTCAGTTGATAGCCTCCGTCATGGCCTGCCTTGTCCTCAAGATCACTCTTGTTGGAATGCATGTCCCAACATACACTATAGCAGCAGAAATGACAGGCTTTGGGGCATCCCTACTGGAGGGTGTCCTAACATTTGCACTGGTCTACACTGTGTATGCAGCTAGGGACCCAAGGCGTGGTGGTGGTCCAGTGGGGTCCATGGGTGCCCTAGCCATTGGCTCAATGGCTGGAGCCAATGTCCTAGCTGCTGGTCCATTCTCTGGGGGATCTATGAACCCTGCTTGTGCCTTTGGCTCAGCTGCCATTGCTGGCAGCTTCAAGAACCAGGCAGTGTATTGGGTTGGACCCTTGATTGGTGCTGCTTTTGCTGCTTTTCTTTATGACAGTGTAGGGTACCCTTCCCAGCCTGCAGATTCTATCAGAGGGGTTGGAGAAGGAGATAGGGTGTGA 771 0.5201 MAPSSLTSRFQESVTRHALRAYLAEFISTFFYVFAVIGSVMSSRKLVPDAALDPASLAVVAIANTLALSSVMFVAWDTSGGHVNPAVTFGRVVGGHISVSTAIFYWLAQLIASVMACLVLKITLVGMHVPTYTIAAEMTGFGASLLEGVLTFALVYTVYAARDPRRGGGPVGSMGALAIGSMAGANVLAAGPFSGGSMNPACAFGSAAIAGSFKNQAVYWVGPLIGAAFAAFLYDSVGYPSQPADSIRGVGEGDRV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1702 256 Pfam Major intrinsic protein 15 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1702 256 Gene3D Glycerol uptake facilitator protein. 5 245 IPR023271 -
Dere08g1702 256 PRINTS Major intrinsic protein family signature 20 39 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1702 256 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1702 256 PRINTS Major intrinsic protein family signature 64 88 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1702 256 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1702 256 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1702 256 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1702 256 PANTHER AQUAPORIN-8 10 237 IPR034294 -
Dere08g1702 256 SUPERFAMILY Aquaporin-like 11 242 IPR023271 -
Dere08g1702 256 ProSitePatterns MIP family signature. 82 90 IPR022357 -
Dere08g1702 256 FunFam Probable aquaporin TIP5-1 4 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1702 Dere-ChrDere08 23072713 23075273 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1702 1 256 Major Intrinsic Protein MIP AT3G47440 62.109 1.62e-106 307