Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1695 ATGGCAGAGAATGACAAAAAATTCCATGGTTATGTTGCACAAACTGACCTGGAGCTTCCAGATATTATTCGTGACATCGTTAGAGAGGTCAAGACTCAAATTGTTTATGTTGGTGATGAGCTAGTTGGGATGCAATCTCGTGTGGAAGATGATGTAGCTCCAGTTGTAGGAATTTGTGGTATGGGCGGAATAGGGAAGACAAATCTTGCTGCATTTATATATAATAGGATCTTTCCCTATTTTGATGCTTTTTGTTTCCTTGCCAATGCAAGTGAAGTTTTAAAGCGTGATGTTCAATATCTGCAAAACTTTCTTTGTGAAAACATGGAGACGAAGAATACAGAGACAAGGTGTTGCCTACGGGGAATGTTCTCAGCGCCAACAAAGCTAAGCCACCACAAGTTTCTCATAGTTTTTGATGGTGTTGATCTTCCACTAAATCCAGAAGCGCTGGATTTTGTTATAGAATCTAACTGGTTTGGAGGAGGGAGTAGAATCATCATAACAACCAGAGATGAAAGAGTCCTTCAGGGGTTCAAAGTGGATGATATTTACCAGCTTGAACTACTGACTAAAGATGAAGCTCTTCAACTATTTTGTAGAAAAGCTTTCAAATGCGATTTTCCTATGGGAGATTACGAAGAGCTGACAGAGAGTATACTTGAATATGCCAATGTTTTTCTATTAATAGTGGAGGTGCTCAGAAAAAGTTTTGATGAATTGAATCATATGAATAAGGAACTATTTTTAGACATGGCATGTTTTTTCATAGGAGAGGAGGTTAATTGTGTAAAGCAAATTTTACATGGTTGTGGTTATTCTGCAGAGATTGGAATTAAACTTCTGACTGAAAAATCACTTATGATCATCTCAGATCAGAGAATAGAAATGCATAATATGTATCGAGAAATGGGACGAGGTGTTGTCCGGCAAGGATTCCCTTATGAGCCATGTGAATGGAGTAGACTATGGCTTTTTTATGACATTTATTACCTTGAAGGATGTACTGCATTATTGGAACTTCATCCATCTTTTGCTGAACTTTCAAAGCTCAAATTCTTAAATTTGAGAAACTGCAGTAATCTTGCCATTATCCCTAACCACTTATTTACTCTAAGCTGCCTGGAAATTCTAAATCTTGCTTGCTGCTCAAAACTTGTGTATGTTTGA 1170 0.3744 MAENDKKFHGYVAQTDLELPDIIRDIVREVKTQIVYVGDELVGMQSRVEDDVAPVVGICGMGGIGKTNLAAFIYNRIFPYFDAFCFLANASEVLKRDVQYLQNFLCENMETKNTETRCCLRGMFSAPTKLSHHKFLIVFDGVDLPLNPEALDFVIESNWFGGGSRIIITTRDERVLQGFKVDDIYQLELLTKDEALQLFCRKAFKCDFPMGDYEELTESILEYANVFLLIVEVLRKSFDELNHMNKELFLDMACFFIGEEVNCVKQILHGCGYSAEIGIKLLTEKSLMIISDQRIEMHNMYREMGRGVVRQGFPYEPCEWSRLWLFYDIYYLEGCTALLELHPSFAELSKLKFLNLRNCSNLAIIPNHLFTLSCLEILNLACCSKLVYV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1695 389 Gene3D - 12 184 IPR027417 -
Dere08g1695 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 251 IPR027417 -
Dere08g1695 389 Pfam NB-ARC domain 50 225 IPR002182 GO:0043531
Dere08g1695 389 PRINTS Disease resistance protein signature 346 362 - -
Dere08g1695 389 PRINTS Disease resistance protein signature 129 143 - -
Dere08g1695 389 PRINTS Disease resistance protein signature 55 70 - -
Dere08g1695 389 SUPERFAMILY "Winged helix" DNA-binding domain 230 329 IPR036390 -
Dere08g1695 389 SUPERFAMILY L domain-like 297 383 - -
Dere08g1695 389 Gene3D Ribonuclease Inhibitor 328 389 IPR032675 -
Dere08g1695 389 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 326 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1695 Dere-ChrDere08 22999068 23000782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1695 56 332 WRKY Transcription Factor Family AT5G45050 33.974 1.91e-44 162