Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1680 ATGGACGCCACACATACCATGTTTTGTCGTCAAGATGATTTGGTCAACCCTCTAAGCTCCATGGGCATGCAAGTGTCCTGCATTCTCGTCATCTCACACTTCTTTAACGTGGTGCTCAAGACTTTTGGTCAGCCTGGATCCATTGCCCAAATTCTGGCTGGGTTGGTTTTAGGGCCAACAGCATTGTCTCATATTAAGCAAATACAAGAGGTGTTCTTTCTTCAAAGTTCCACAAATTATTATGAAGTTGTGAGCTTCTTCTGTAGAATCCTCATCACGTTCTTGTTTGGGTTAGAGATGAATATTCAGTACACCATGCTCAACCTGCGTCTGGTCAGTTTGGTAGCTTGTGGTGGTGCAATAGTGGGTGGCATTTTCGGTTTAGGTGTCTCCTTTTATTTGTTCAGGCAATTACAAAACACTGCCTCAATGCCCTATTTTTGCATGATCATTATGCTTATCATATCATACACGAGCTCTCCCCTAGTGATACGTTTAGCATCAGAGATGAAGTTGTCTTCATCCAACATGGGGCGAATCGCGGTGTCTTCTGCAATAATCACAGAAATGGGTTGCTTGTTATTTTTTAATTTGATAGTTAATTGGCATGGAAAAAATTTTTTGACTGGATTTGGTTGCATTATAATTACTGGATTGGTGATTCTTATAAACAAGCATTTAGCCTTATGGCTGAATAGAAGACATGCAAACCAAAAGCACCTGAAGGCTCCTGAGCTATTACTCATCCTGTTCCTTCTTGTAGGTAGCTCAATGATTACAGAAATTTCGGGTTTCAACAGTATTATTAGTTGTTTTGCCATTGGCTTGATGTTTCCCAGGGAAGGCAAATCAGCCAGAACATTGATACATAAACTGGGCTATTCTATTTACAACTTTGTACTTCCAGTATACTTTGGGTACATAGGTTTTCAGTGTAACTTAATTGCCTTAAAGAACCTGAATGATATAACCAATGTAGCCATATTGATCTTGTTGAGCATTGGCAGCAAGCTTAGTGGCACTCTTTTAGTTTGCCATTACCTTCAAATTCCTCCAACTGAAGGAATTATTCTTGGCTTCATGTTGAACACCAGGGGGTATGCTGATCTTTTATTTTTTGGTGCAGCAGCCAAGGGAATAATTAGTTTTTCTGCTGAAGCTTACAATGTCTTGGTAGTAGCAATAGTACTTAACACAATTATATCAGGAATCATTGTTGCTTTTCTAACCAGAGGGGATGAAAAAATGTTTGCAAACCATCATACTGCTCTTGAATCACAACAAGTGGAGGATGAGCTTCGAATTCTAGCTTGTGTATATGATCCTCGTCAAGTATCTGCTGTACTAGCATTGGTTTTAGCAATAAATGGCTCTAAAACATCACCAGCTACCATTTACTCAATGCACCTAGTAGAGCTTGTAAAGAAGATCAAGTCAAACATGTTATACCACCAAAAGGAAAACACTGAGCTTAGTGACGATGAAGACTATGGTGGCAATGATGTAGTGGAAATTAATGATGCTATAGACACCTTCACCATGCAGACAAAGATTTTGATTCACCAAAGAAAGGCAGTATCTTCTTTTCCAAGTTTGTATGAAGATGTTTGCAATGATGCAGAAGATTTACATGTAGCCATTATTTTGCTTCCTTTTCACAAACATCAACGTATTGATGGAAAATTGGAAAGTGGGAAGGAAGGCATAAGGACCACTAATCAAAAGGTTCTTAGACATGCCCCTTGTTCTGTTGGTGTCATTGTAGAAAGAGGACTTAGTAGGGTCCCTGGCTTTTCACAACTAACTGCCTCTGATGGCATCCAGAATGTTGCAACACTTTTCTTTGGAGGTTCAGATGATCGTGAGGCTATTGCTTGGAGCATACGCATTTCACAACATTCTCGAATCAATTTGACAATCATCCGATTTCTACTTGCTTCTTTGCCACAAAATGAAATTGGAGATGAAGATTTAGATGGGAAAGAAATTTTAATGTCATTGTCAGGGCAAGAGACTGTGAATGAGATTGATAATACCTTTATGGTTGACTTCTACAATAGGTATGTGGCTTCAGGTCAAATTGGATATGTGGAGAAATTTGTGAGAAATGGAGCACAAACAGTTCAAGTTTTGAAAGAAATAGGGGATATGTATTCTTTGTTTATTGTAGGAAAGGGTGGTAGAGGTCATTGTTCATTGACGATAGGAATGAGTGACTGGGAGGAGTGTCCGGAACTTGGAACAGTTGGTGATGTCTTGGCTTCTTCAGAACTGGCTATTCATGGCTCAGTTTTGGTTGTGCAACAGCATAGGGATGCCAAGAAAAATCTAATGCATGATTAA 2343 0.3931 MDATHTMFCRQDDLVNPLSSMGMQVSCILVISHFFNVVLKTFGQPGSIAQILAGLVLGPTALSHIKQIQEVFFLQSSTNYYEVVSFFCRILITFLFGLEMNIQYTMLNLRLVSLVACGGAIVGGIFGLGVSFYLFRQLQNTASMPYFCMIIMLIISYTSSPLVIRLASEMKLSSSNMGRIAVSSAIITEMGCLLFFNLIVNWHGKNFLTGFGCIIITGLVILINKHLALWLNRRHANQKHLKAPELLLILFLLVGSSMITEISGFNSIISCFAIGLMFPREGKSARTLIHKLGYSIYNFVLPVYFGYIGFQCNLIALKNLNDITNVAILILLSIGSKLSGTLLVCHYLQIPPTEGIILGFMLNTRGYADLLFFGAAAKGIISFSAEAYNVLVVAIVLNTIISGIIVAFLTRGDEKMFANHHTALESQQVEDELRILACVYDPRQVSAVLALVLAINGSKTSPATIYSMHLVELVKKIKSNMLYHQKENTELSDDEDYGGNDVVEINDAIDTFTMQTKILIHQRKAVSSFPSLYEDVCNDAEDLHVAIILLPFHKHQRIDGKLESGKEGIRTTNQKVLRHAPCSVGVIVERGLSRVPGFSQLTASDGIQNVATLFFGGSDDREAIAWSIRISQHSRINLTIIRFLLASLPQNEIGDEDLDGKEILMSLSGQETVNEIDNTFMVDFYNRYVASGQIGYVEKFVRNGAQTVQVLKEIGDMYSLFIVGKGGRGHCSLTIGMSDWEECPELGTVGDVLASSELAIHGSVLVVQQHRDAKKNLMHD 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1680 780 Gene3D - 20 418 IPR038770 -
Dere08g1680 780 PANTHER CATION/H + ANTIPORTER 16 771 - -
Dere08g1680 780 Pfam Sodium/hydrogen exchanger family 28 410 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1680 Dere-ChrDere08 22611155 22613997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1680 7 773 Antiporter Super Family AT1G16380 40.967 0.0 589