Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1677 ATGGCAACATGTTGTCCAAGTTGCTCCCAGTTTACGCTAAGTTCCTCTCTTGCACCTTTGTTTCCGCACTCCTTCAGCGTTGCTTCCCTCTTCAGTCTCCCTTCTAGTTCTGTGAGACCTGCGAGTCTCCATTGTTTGCATAATTGTCAGAGAGTTTGGTTTCGGTCAGGCCGTCATTGTGGTCCCTTACTACTAGCTTCGTCGTGCAGCAATTTGGAGCCTGCTGAACTGCATGAAGCCCGGAATGCTGTTTCAAAATTTCTTCAAGAATTCGGGGTGTCTGAAAAGGAATCCATTTCTATTGTGTCTAATTCACCCCGGTATTTGAGGATGCTGGTTGACGAGGTTCGGGATTTGGACGAGATTTCAATGTGGGATGAACATATTTGCGGGTTTCAGGAGAAGGTAGTTCACATTGCAAGGAAGAAAGGTGATTACGGCAAAGTTGCATACTTGGAGAGTCTTGGCTTGAGCCTCTCTTCGGCCTTGAATGTCGCCAGGCATCTGTCGGCAGAAACACTTGCTGCACTCATTGTTAAGGTTAAGTGTATGAAGGAACTGTTCTTTTCTGGCAGTGAAAATTATGAGTTCCCGGTAAAAAGTGTTCGAAGAATGATGATGCAGTTATCAGTTCCTATTGATGATGATCTGCAGCAGACTCTGTCCTTTTTTGAGAAGGTTGAAGCAAGGCGTGGAGGTTTAAACATGTTGAATTCAAGTGATGCTTCTTTCGATTATTTGATTGAATCATTTCCTCGTCTACTTTTGTTATCAGTAAAATTTCACATGAAGCCTTTAGTGGAATTTCTTGAAAGTGTTGGAATCCCCAGAGGTCTTATCAGAAATATAATACTGATTTTTCCTCCGTCTTTGCTGTGGAATATTGAAGTTTTTAAAACTAGAGTACTAGCCTTGAAGGAGATTGGAGTAGAAAATAAATATTATGCCAAGGTGCTGCAAAAATATCCTTGGATACTATCTACAAGCATTCAAGAGAATTATCGAGAGGTCCTTTCTCTGTTTGAGTCAGAGAAGGTTCCAAAGGCATGCATTGATCGTGCAATCAAAAGCTGGCCGCATATATTGGGTTGTTCATCTAGCAAGCTAAAGTTGATGGTTGATCAGTTTGGTGAACTAGGAATTCAACACAAGAAGTTAGGTCAAATTATTGCTAAAAGTCCTCAGCTACTGTTACAGAAGCCCCAAGACTTTCTCCAGGTTGTTCTGTTCTTTGAAAATATGGGTTTTGATAGAGAAACAATTGGGAGAATACTGGTTCGCTGTCCTGAAATCTTTGCTGCTAGCACTAGTAAAACTCTCAAGAGGAAGATTGAGTTCCTTAGTGGTGCCGGTGTTTCTGAAATTCATCTTCCTCGGGTTATAAAAAAGTATCCAGAACTTCTTGTGTCTGACCCAGACAGAACTTTACTACCACGGATTATGTACTTAATGAAGTTAGGACTATCAGAGAAAGACATTGCATACATGGTGCGATCATTTTCTCCTCTGCTTGGATACAGCATAGAGGAGGTTCTGAGACCAAAAGCAGAATTCCTGGTGAACACAATGGAGAGGCCAGTGAGGGATCTAGTGGGCTATCCGAGGTATTTTAGCTATTCTTTAGAAAAGAAGATAAAGCCCAGATTTTGGGTGTTGAAAGGAAGGAATATTGAATTTAGTTTAAAGGATATGCTGGGAAAAAATGATGAAGAATTTGCTGCTGAATATATGAGTCTCCCATCTCCTCATCCTTGA 1755 0.4131 MATCCPSCSQFTLSSSLAPLFPHSFSVASLFSLPSSSVRPASLHCLHNCQRVWFRSGRHCGPLLLASSCSNLEPAELHEARNAVSKFLQEFGVSEKESISIVSNSPRYLRMLVDEVRDLDEISMWDEHICGFQEKVVHIARKKGDYGKVAYLESLGLSLSSALNVARHLSAETLAALIVKVKCMKELFFSGSENYEFPVKSVRRMMMQLSVPIDDDLQQTLSFFEKVEARRGGLNMLNSSDASFDYLIESFPRLLLLSVKFHMKPLVEFLESVGIPRGLIRNIILIFPPSLLWNIEVFKTRVLALKEIGVENKYYAKVLQKYPWILSTSIQENYREVLSLFESEKVPKACIDRAIKSWPHILGCSSSKLKLMVDQFGELGIQHKKLGQIIAKSPQLLLQKPQDFLQVVLFFENMGFDRETIGRILVRCPEIFAASTSKTLKRKIEFLSGAGVSEIHLPRVIKKYPELLVSDPDRTLLPRIMYLMKLGLSEKDIAYMVRSFSPLLGYSIEEVLRPKAEFLVNTMERPVRDLVGYPRYFSYSLEKKIKPRFWVLKGRNIEFSLKDMLGKNDEEFAAEYMSLPSPHP 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1677 584 PANTHER CGI-12 PROTEIN-RELATED 480 578 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 Pfam mTERF 267 573 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 Pfam mTERF 84 301 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 SMART mt_12 422 453 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 SMART mt_12 352 382 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 SMART mt_12 458 489 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 SMART mt_12 316 347 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 SMART mt_12 494 526 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 SMART mt_12 527 558 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 SMART mt_12 387 417 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 SMART mt_12 281 311 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Dere08g1677 584 Gene3D Transcription termination factor 3, mitochondrial 367 581 IPR038538 -
Dere08g1677 584 FunFam Mitochondrial transcription termination factor family protein 367 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1677 Dere-ChrDere08 22570310 22575449 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere08g1677 mTERF 2.8e-97 No_clan