Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1674 ATGGGAGGCGCAGAAGTGGTGAGTCATCCATTAGTGCCAGAAGATGCCACGGTAAAAGCTGAAAATTCCGACCAAGAGAGCACAAACAGGATGTCTCCGCCAAACTTCAAGGACTTACAAGTCGGAGATTATGACATTGCTAATGAGAAAAAGAAAGTTGGGTTTGAGAAAGTTCATGGTTTCAAGAGTTTACTATCTCCTACAAGAAGAGTGATGATGGAGAGAGTCCTGGGTAAAGGAGATGAATTTTTGAAATCCAAGTCACGGCATTTATCATCTTCAGTTGTTGCTGTAGCTATCAAGGGTAACAAGAAAAGCAAGCATGTGGTACAATGGGCACTGGATAAGTTCGTTCCTGAGGGGAGAATTATGTTTAAGCTGATACATGTCAATGCTCCTGCTTTCAAGGAAGTGGAGTGGCAGACAAGTCAAATGCTTCTACCTTTTGAGAAAATGTGTGATCAGAGAAAGGTACATGTAGATGTTGTAGTGATTGAATCTGACGATGTGGGAACTGCAATAGCAGAGGAAGTTGCTAAGGGTGTTATAAGCAAACTGGTTATAGGAGCTTCATCTCATGCCCTATTTACAAGTAAACTGAAGGGTCTATCCGCAAAAATCTCGACAGGCACTCCAAGATTTTGTACAGTGTATGCAGTTTCCAAAGGGAGATTGTCCTCTTTACGGCCATCAGACATTGAGATTGATGGAAGCTTAATAGACGACAGTAGTGATACCAGTTGTTCCACCAATAGCTCATCAAACTACACTTTCACCTCTCAGACAGACTCTGGCTTAGTTGCATCATTTGCTCCTATACGGTCTTCTTCCCTAGCAGCCCAGCGATATCAAGCTCTTTCAACCATTAATCAGACCCTTCAAAACACAAAATCTGGTTTAATTGAAACTTACCATTCTAGATGCCAATCTCTAGATCTTGGGATAGATCATACTGTTACATCTTCTCCTGCCAGAAATTCAGATATTGACTATGCTCTGAGCCGGGTCTCTAGCTGCAAAAGCAATCTATCTGATATTGAATCTTGTAATTGCTATCAAAATCCCACCATGGATGTGCTTCCGGTAACTGATTCACCTGATAGGCAGGCAAATTTTAACCTTGAGCTGGAAAAGCTGAGAATTGAACTAAGGCATGCCCAAGGAATGCACACGATGGCTCAAAGTCTAAACATTGATGCAACGCAAATAATGAACAATCTAAGTAAGAAGCGATTAGAGGAATCCATGAAATTGAAGGAAATTATTGCTAAGGAGGAGATGGCCAAAAAATTAGTAATACAAGAGAGAGAGAAATGTGAGGCTGCACATAGAGAGGCTGCCTATTTGAAAAGATGTGCTGAAGATGAAGCCTTTGAAAGAAGAGATGCGGAGACGAAAGTTGTTCAAGCTGCCGAAAGGAATGAAAAGCTAGAGAATGCTCTTAGTGGTTCCATGCCTCAATATAAGAAGTTTACATGGGATGAAATAGTTTTAGCTACCTCATCTTTCTCTGAAGAGCTTAGAATTGGAATGGGAGCATGTGGAACAGTGTACAAGTGTAATTTGTATCATACAAATGTGGCGGTAAAAGTTCTTCACTCTAAAGAAAACCACAGTATCAAACAACTCCAGCAAGAGCTAGAAATCTTGAGCAGAATTCGTCATCCAAATTTACTTCTCCTTCTTGGGGCTTGTCCTGATCATGGATGCCTTGTGTACGAATACATGGAGAATGGTAGCTTGGAGGACAGGTTATTCCAGAAAAACAGTACTGCCCCAATCCCATGGTTCAAGAGGTACCAAATTGCATGGGAAGTAGCCTCAGCTCTTGCCTTTCTTCACGGCTCAAAGCCGAAACCTATCATCCATCGTGATTTGAAACCGGCAAACATCTTGCTAGATTGTAACCTTGTGAGCAAGATTGGTGATATAGGCCTTTCTACAATACTCCATTCAGATAATTTCTCTACAATGTACAAGGACACAGAGCCTGTTGGGACACTCTCCTATATAGATCCCGAGTACCAAAGGACAGGGTTAATATCTCCCAAATCTGATGTTTATGCTTTTGGAATGGTGATTCTACAGTTATTAACTGCAAAACCAGCTAGAGCACTTACTCATGTGGTAGAAACAGCATTTGACGTTGGAAATTTAGCAGATATATTGGATCCTAAGGCAGGGAATTGGCCACTTCAGGAGACTTTGGATTTAGCTCGATTAGGCCTAAGCTGTGCAGAACTACGGCGTAGGGATAGGCCTGATTTGAGAGATCATGTGCTTCCCACACTGGAGAAGCTAAAAGATGTTGCCGATAGGGCTCATGCTTCTGCTTCAATGGTTACTGTTAAATCCAGACCTCCCAATCACTTTATCTGCCCAATATGTCAGGATGTGATGGATGATCCTTGTGTTGCTGCAGATGGATATACATATGATCACAAAGCAATCGTAACTTGGTTGCAAAAGAATGACAAATCACCAATGACAAATATGAAATTACCTCATAAGAATCTGATTCCTAATTACACGCTTTTATCAGCTATTATGGAGTGGAAATCTGGAGAAAAAAGTCATAAACATTGTTAA 2589 0.4121 MGGAEVVSHPLVPEDATVKAENSDQESTNRMSPPNFKDLQVGDYDIANEKKKVGFEKVHGFKSLLSPTRRVMMERVLGKGDEFLKSKSRHLSSSVVAVAIKGNKKSKHVVQWALDKFVPEGRIMFKLIHVNAPAFKEVEWQTSQMLLPFEKMCDQRKVHVDVVVIESDDVGTAIAEEVAKGVISKLVIGASSHALFTSKLKGLSAKISTGTPRFCTVYAVSKGRLSSLRPSDIEIDGSLIDDSSDTSCSTNSSSNYTFTSQTDSGLVASFAPIRSSSLAAQRYQALSTINQTLQNTKSGLIETYHSRCQSLDLGIDHTVTSSPARNSDIDYALSRVSSCKSNLSDIESCNCYQNPTMDVLPVTDSPDRQANFNLELEKLRIELRHAQGMHTMAQSLNIDATQIMNNLSKKRLEESMKLKEIIAKEEMAKKLVIQEREKCEAAHREAAYLKRCAEDEAFERRDAETKVVQAAERNEKLENALSGSMPQYKKFTWDEIVLATSSFSEELRIGMGACGTVYKCNLYHTNVAVKVLHSKENHSIKQLQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGSLEDRLFQKNSTAPIPWFKRYQIAWEVASALAFLHGSKPKPIIHRDLKPANILLDCNLVSKIGDIGLSTILHSDNFSTMYKDTEPVGTLSYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPARALTHVVETAFDVGNLADILDPKAGNWPLQETLDLARLGLSCAELRRRDRPDLRDHVLPTLEKLKDVADRAHASASMVTVKSRPPNHFICPICQDVMDDPCVAADGYTYDHKAIVTWLQKNDKSPMTNMKLPHKNLIPNYTLLSAIMEWKSGEKSHKHC 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1674 862 Pfam Protein kinase domain 505 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1674 862 CDD RING-Ubox_WDSUB1-like 788 842 - -
Dere08g1674 862 SUPERFAMILY RING/U-box 785 853 - -
Dere08g1674 862 ProSiteProfiles U-box domain profile. 786 859 IPR003613 GO:0004842|GO:0016567
Dere08g1674 862 SUPERFAMILY Protein kinase-like (PK-like) 484 758 IPR011009 -
Dere08g1674 862 SMART Ubox_2 790 852 IPR003613 GO:0004842|GO:0016567
Dere08g1674 862 Gene3D Transferase(Phosphotransferase) domain 1 576 785 - -
Dere08g1674 862 SMART serkin_6 503 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1674 862 Coils Coil 460 480 - -
Dere08g1674 862 PANTHER OS02G0152300 PROTEIN 95 851 - -
Dere08g1674 862 ProSiteProfiles Protein kinase domain profile. 503 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1674 862 CDD STK_N 95 223 - -
Dere08g1674 862 Pfam U-box domain 788 855 IPR003613 GO:0004842|GO:0016567
Dere08g1674 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Dere08g1674 862 Gene3D Phosphorylase Kinase; domain 1 472 575 - -
Dere08g1674 862 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 786 861 IPR013083 -
Dere08g1674 862 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1674 Dere-ChrDere08 22506301 22516594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1674 93 854 U-box Gene Family AT4G25160 48.801 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dere08g1674 Pkinase 5.2e-39 CL0016