Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1672 ATGACCCACATGGTGATATTTCTTCTTGGACTAACTTGCACAGCATTTTTTACCATTCTTGTACTTTATATCTTCTTTTACCGCAAACGAACAACAACACATGAGAGTAAAGACATAGAAAGCTCAGGATTCAAACATGAAGACACAGTGCAGAAAGAGGACTTGGTGATCTTCCAAGGGGGTGAGAACCTCACGATATGTGACATTCTTGATGCTCCAGGGGAAGTAATTGGAAAATCCAATTATGGTACGCTTTATAAGGCTTTATTGCAGCGAAGCAATGCAGTGAGGCTTCTGAGATTTTTGAGGCCAGCATGCACTACTAGAGGTGAAGAATTGGTTGATGTGGTTAGGATGATTGGAGAGATAAGGCACCCCAATTTGGTCCCTCTTGTGGGGTTTTACACTGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCCTTTTATGGTCATGGGAGTCTCACTCAGTTCATAAGAGATGGAAATGGCGAGTGTTACAAATGGGCTACGATATATCAAATATCCTGCGGTATAGCCAAAGGACTAGAGCATCTTCATACAGGACTACAGAAGCCTGTGGTCCATGGGAACCTCAAGTCAAAAAACATCCTTTTAGATCGCAATTACCAGCCATACATCTCTGATTTTGGCCTGCATCTTCTGTTGAATCCTACTGCTGGCCAAGAAATGCTTGAAGCTTCAGCTGCTCAGGGTTACAAGGCACCTGAACTGATCAAAATGAAGGATGTCAATGAAGAGACTGATATATATAGCCTTGGTGTGATCTTGCTTGAGTTACTTTCAAGGAAGGAGCCTATTAATGATCATCCGACCCCTGATGAGGATTTCTATTTGCCAAATTTCATGCGAACTGCAGTGCTCGGACATAGAATTTCTGATTTGTACCATCCAGCCATTCTTGTCAGCAACAACAGAGACGATGGAACCCCGGTTAGCGAAGAATGCATTCTCAAGTTTTTTCAACTTGCTATGTCTTGTTGTTCTCCTTCGCCTTCAATTAGGCCTAACATAAAGCAAGTCCTTTGGAAGCTTGAGGAGATTATCAAGTAA 1071 0.4267 MTHMVIFLLGLTCTAFFTILVLYIFFYRKRTTTHESKDIESSGFKHEDTVQKEDLVIFQGGENLTICDILDAPGEVIGKSNYGTLYKALLQRSNAVRLLRFLRPACTTRGEELVDVVRMIGEIRHPNLVPLVGFYTGPRGEKLLVHPFYGHGSLTQFIRDGNGECYKWATIYQISCGIAKGLEHLHTGLQKPVVHGNLKSKNILLDRNYQPYISDFGLHLLLNPTAGQEMLEASAAQGYKAPELIKMKDVNEETDIYSLGVILLELLSRKEPINDHPTPDEDFYLPNFMRTAVLGHRISDLYHPAILVSNNRDDGTPVSEECILKFFQLAMSCCSPSPSIRPNIKQVLWKLEEIIK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1672 356 Gene3D Transferase(Phosphotransferase) domain 1 150 356 - -
Dere08g1672 356 Gene3D Phosphorylase Kinase; domain 1 72 148 - -
Dere08g1672 356 SUPERFAMILY Protein kinase-like (PK-like) 74 351 IPR011009 -
Dere08g1672 356 Pfam Protein tyrosine and serine/threonine kinase 74 349 IPR001245 GO:0004672|GO:0006468
Dere08g1672 356 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 46 354 - -
Dere08g1672 356 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1672 Dere-ChrDere08 22463907 22465898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1672 29 356 Carbohydrate Esterase AT5G61570 58.284 5.36e-137 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere08g1672 PK_Tyr_Ser-Thr 1.5e-31 CL0016