Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1648 ATGGCAGATGTCGTGAACATTTCTGCCGATTCTCTGGACAAGTCCCCTTCCTCTGCTTCGGCTTCTGCTCCGCCGGCGCCGCCTGCCGCAGTCGTCGTCGATGACGATCTCCCACCGCCTCCGCCTGAGCCGACTGTGTCAGCGCAGTCGCATCCCCCTCCGCAATCTTCGTCCCGGAGAAGGGATAGGATGGATGATAGGGATTTTGATCGCCCCGCGAATCGCCGTGGAGCGGATGTCTATGAGAGGAACATGTCGCCCCCACCGCCTCCGAGAGATAGAGATAGGGACTTCAAGCGCCGTCGCAGCCCCAGCCCCTCTTATCGTGACCGACGATATTCTCCTCCCCGGCGCTCGCCTCCGCCTTATAAGCGATCCAGAAGGGGGAGTCCCCGCGGCGGCTATGGACCCGATGACAGATTTGGCTATGATTATTTTGGCGGGTATGAACGTGGAATGGTGGGAAGACCTGGTTACGTAGATGAGAAGCCTTATGGCAGATTTGGTCACCGTTCTATGGCCGGGTATCAAAATGGGATTTCGGACCTGGAATCAAATCGCAGTTTTGCAGATTTGCCAAGTGGTGGTATACCAAGAGAGGGTTTGATGTCTTATAAGCAATTCATTCAGGAGCTTGAGGATGATATATTGCCAGCTGAAGCTGAGCGTAGGTATCAAGAGTACAAATCAGAGTACATTACTACACAGAAACGGGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTGAGAGATAAATATCATCCAACAAACTTACTAGTGGTGATTGACAGGAGGAACGAGACTGCTCGCCGACTGGCGAAGGATTTTTTGCTAGATTTACAGAGCGGAACACTAGATCTAAATCCTGGTCTGAGTGCCTCTTCAGCCAGTAAGTCAGGGCAAGCAAGTGAGCCCAATTCAGAGGAGGAAGCAGACACTGGTGGTAAACGAAGACGACATGGTAGGGGACCTAATAAAGAAAATGATTTTGCAGCCGCTCCTAAGTCTCATCCAATCAGTTCTGAACCTAGACGAATACAAATTGATATTCAACAGGCTCAGGCCCTTGTGCGCAAGCTTGACACTGAAAAGGGAATTGAAGATAATATTCTATGCACCAGTGATCACAACAAAAATGATGATAAGGGATCTGTCGGTCCGATAATAATTATACTGGGCCTAACATCTGTCAAGGGCTTAGAAGGCATCGAGCTTTTGGACACACTTCTAACATATCTTTGGCAGATTCATGGCGTAGATTATTATGGCATGATTGAGACTAATGAGGCTAAGGGTTTTAGGCACGTGAGGCCAGAAGGAGGGCATGAAGACACAAGTAAATCTGGGTCTGAATGGGAAAAGAAACTTGACTCATTTTGGCAGCAAAGGTTGAGTGGTCAGGATCCATTGGAGATAATGACTGCTAAGGAGAAGATAGACGCTGCAGCAGTTGAAGTGTTGGATCCACATGTTAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGGGCTAAGGGCTGTACAAAGCTTTTTCACGCTGCTGAATTTGTGCACAAACATCTGAAGCTTAAACACCCAGACCTTGTGATGGAATTAACTTCAAAAGTGCGTGAGGATCTCTATTTTCAGAACTACATGAATGATCCAGATGCTCCAGGTGGAACACCTGTTGTGCAGCAACCTCAGAAGGACAAACCTCTAAGGCGTAGGTTAGGTCTGGAAGGTCGACTGAGAGATGATCGTGGCAATCGAAGAGACCGTGATCGGATTGACAGAATGAATGATGGAGATAGGTCTGAGAACTCGCCATCTCATGATCGGCTGACTAAAGCTCTTGAGATGGGAAACCATGATGAAACTATGTATGACGCATATGCAGGATCTGCTGTTCCTACATTTACCTCAGACATGCCCCCTCCTCCACCAGTTTTGATGCCTGTACCTGGTGCAGGACCTTTAGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTAAGAGAGCAAGGACCATCATCATATGATAACAGTGGAAGGAAAATGCGATCTGGTCCTCACATGGGTGGAGGTGGAGCACCAATAATTGCTGTTCCCCCAGCTTTTAGACCAGATCCTCGGCGGATGCGAAGTTATCAAGATCTGGATGCCCCGGAAGATGAAGTCACCGTGATAGACTATCGGAGTTTGTAG 2208 0.4823 MADVVNISADSLDKSPSSASASAPPAPPAAVVVDDDLPPPPPEPTVSAQSHPPPQSSSRRRDRMDDRDFDRPANRRGADVYERNMSPPPPPRDRDRDFKRRRSPSPSYRDRRYSPPRRSPPPYKRSRRGSPRGGYGPDDRFGYDYFGGYERGMVGRPGYVDEKPYGRFGHRSMAGYQNGISDLESNRSFADLPSGGIPREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYITTQKRAYFNAHKDEEWLRDKYHPTNLLVVIDRRNETARRLAKDFLLDLQSGTLDLNPGLSASSASKSGQASEPNSEEEADTGGKRRRHGRGPNKENDFAAAPKSHPISSEPRRIQIDIQQAQALVRKLDTEKGIEDNILCTSDHNKNDDKGSVGPIIIILGLTSVKGLEGIELLDTLLTYLWQIHGVDYYGMIETNEAKGFRHVRPEGGHEDTSKSGSEWEKKLDSFWQQRLSGQDPLEIMTAKEKIDAAAVEVLDPHVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPDLVMELTSKVREDLYFQNYMNDPDAPGGTPVVQQPQKDKPLRRRLGLEGRLRDDRGNRRDRDRIDRMNDGDRSENSPSHDRLTKALEMGNHDETMYDAYAGSAVPTFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGPSSYDNSGRKMRSGPHMGGGGAPIIAVPPAFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1648 735 Pfam Arsenite-resistance protein 2 446 582 IPR007042 -
Dere08g1648 735 MobiDBLite consensus disorder prediction 290 309 - -
Dere08g1648 735 MobiDBLite consensus disorder prediction 548 611 - -
Dere08g1648 735 MobiDBLite consensus disorder prediction 88 117 - -
Dere08g1648 735 MobiDBLite consensus disorder prediction 567 611 - -
Dere08g1648 735 MobiDBLite consensus disorder prediction 310 327 - -
Dere08g1648 735 MobiDBLite consensus disorder prediction 676 720 - -
Dere08g1648 735 MobiDBLite consensus disorder prediction 56 78 - -
Dere08g1648 735 MobiDBLite consensus disorder prediction 1 139 - -
Dere08g1648 735 Pfam SERRATE/Ars2, N-terminal domain 206 287 IPR021933 -
Dere08g1648 735 ProSitePatterns Zinc finger C2H2 type domain signature. 506 529 IPR013087 -
Dere08g1648 735 MobiDBLite consensus disorder prediction 31 49 - -
Dere08g1648 735 PANTHER ARSENITE-RESISTANCE PROTEIN 2 57 733 IPR039727 GO:0006397
Dere08g1648 735 MobiDBLite consensus disorder prediction 290 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1648 Dere-ChrDere08 22108352 22117828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1648 72 735 C2H2 Transcription Factor Family AT2G27100 63.372 0.0 754