Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1637 ATGGGGATCCAAACTATGGGGTCTCAAGGCGGTGGTGACAGTAATGGAAAACAGTCACAATTCCAGCCTTTGGTGCGGCAAAACTCAATGTACAGTCTCACACTTGATGAGGTTCAGAATCAATTAGGTGACTTAGGAAAGCCACTAAGTAGTATGAACCTTGACGAGCTTCTGAAAAATGTATGGACTGCTGAGGCAAACCAGTCCATGGGTATGGACATTGAAGGCACAGCACAAGCTAGTCAAACTGCTCTTCAGCGTCAGGCTAGTCTGTCACTAACTAGTGCACTTAGCAAGAAGACAGTTGATGAGGTATGGCGAGATATCCAACAAAGTAAAAGTAATGAGGAGAAGAAGTCTCAGGAGAGGCAGCTGACTTTGGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGAGTTGTTGCAGAAGCATCTTCTGATAAAAAGAATATGGGTCCTGTGGTTGGGGTTGATTCAAATGTAGCAGCACCACAGTTTCCTCAGCAAGGTCAGTGGATTCAGTATCCACAACCACAATATCAGCATCCTCAACCAAGTTTAATGGGACTTTATATGCCTGGCCATACTATGGCACAGCCATTACATATGGGAGCTGGTTCTGCATTGGATGTTCCTTTTGCAGAAATTCCTGTGGCAATGCCTTCACCTGTGATGGCGACATTGTCAGATACGCAGACATCTGGAAGAAAAAGAGGCACACCAGAGGACATGATCGAGAAGACTGTTGAGAGGAGGCAGAAAAGGATGATAAAAAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTATACACATGAATTGGAGAGCAAAGTCTCACGATTGGAAGAGGAAAATGAATTGTTGAGGAAACGGAAGGAACTAGAGAATATGTTGCCATGTGCACCACCTCCCGAGCCCAAATATCAGCTCCGGCGAACAACATCAGCCCCATTTTGA 969 0.4551 MGIQTMGSQGGGDSNGKQSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEANQSMGMDIEGTAQASQTALQRQASLSLTSALSKKTVDEVWRDIQQSKSNEEKKSQERQLTLGEMTLEDFLVKAGVVAEASSDKKNMGPVVGVDSNVAAPQFPQQGQWIQYPQPQYQHPQPSLMGLYMPGHTMAQPLHMGAGSALDVPFAEIPVAMPSPVMATLSDTQTSGRKRGTPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTHELESKVSRLEEENELLRKRKELENMLPCAPPPEPKYQLRRTTSAPF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1637 322 SMART brlzneu 248 304 IPR004827 GO:0003700|GO:0006355
Dere08g1637 322 MobiDBLite consensus disorder prediction 257 322 - -
Dere08g1637 322 Gene3D - 250 303 - -
Dere08g1637 322 MobiDBLite consensus disorder prediction 257 300 - -
Dere08g1637 322 SUPERFAMILY Leucine zipper domain 252 297 IPR046347 GO:0003700|GO:0006355
Dere08g1637 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 295 IPR004827 GO:0003700|GO:0006355
Dere08g1637 322 CDD bZIP_plant_BZIP46 252 306 - -
Dere08g1637 322 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 250 302 - -
Dere08g1637 322 Coils Coil 275 302 - -
Dere08g1637 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 25 321 IPR043452 GO:0003700|GO:0045893
Dere08g1637 322 MobiDBLite consensus disorder prediction 1 25 - -
Dere08g1637 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 255 270 IPR004827 GO:0003700|GO:0006355
Dere08g1637 322 Pfam bZIP transcription factor 252 297 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1637 Dere-ChrDere08 21886476 21889936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1637 17 322 bZIP Transcription Factor Family AT3G56850 55.449 1.30e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere08g1637 bZIP_1 6e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1637 08 21886476 21889936 Dere08g1637 08 21886476 21889936 ECH