Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1636 ATGGTTGTTAGGGGTAGCTGTAGATGGCTGGCAATTGTAAGACGTACTATGATGGTGCATGGGGAAGTCCCAGGAGATGTGTTGCATGCCTATGAAGTAGGGAGGATTAGTCTGTGGAATCATGTCAGTAGAAACACAGCTCTGTTTGGAGTTTCTTGTAAACCGATTAAAGAATGGGGTTTTGATCATGGTAATTTGCTTTCTGTAGTTGGAAAATGGCCATGGCGTTTCTTTCTAGAGACCTCTACCTTATGGCATGCAACTGGACTGGAATTATTTTTCTTGTTGCTAGATTTGTTTCATTTGTCTTCTGAACTGGACTGGAGGACTTGGGCTCTTGATCCTTCTATTTTGTTTTCCCGTAAATCCATTTTTCATTTCTTCACTCAGTCCCTGTGCTGTACGATCAAGCTGAGAGCTGTTGTTGCCATCATGGATATAGATCTTAGGTTACCTTCTGGTGGACATGATAAGGAGGATGAGGAACCAAATACAATTGCTAACATATTGGATGATGAAGAGAAATTGCATAATGGAGATCTAGAAGGCAGGAATATGGTTGGCACTACTGTTGACATACATGCTCTAGATGGTGGAGATTTGAATTCACCCACAGTGGATATGGTAATTTTCAAGGATGATACAAATCTTGAGCCCCTTTCTGGCATGGAATTTGAGTCTCATGGGGAAGCTTATTCCTTCTACCAAGAATATGCAAGGTCAATGGGATTTAGTACTGCAATACAAAATAGTCGTCGTTCAAAAACATCAAGAGAATTTATAGACGCAAAATTTGCTTGTTCCAGATATGGAACAAAACGAGAGTATGACAAATCATTCAATCGACCCCGTGCCAGACAGAACAAGCAAGATGCTGAAAATTCAACTGGTCGAAGATCTTGTTCAAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGACCTGATGGGAAATGGGTAATACATAGTTTTGTGAAGGAACATAATCATGAGCTTTTACCAGCCCAAGCTGTCAGTGAGCAAGCGAGAAAGATGTATGCTGCAATGGCTAGACAGTTTGCTGAGTACAAAACTGTGGTTGGTCTCAAGAATGAGAAAAATCTATTTGATAAAGGTCGAAATTTGGGCCTGGAGTCAGGGGATGCCAAACTTCTGCTTGATTTTTTTGTACAGATGCAAAGTATGAATTCAAACTTCTTTTATGCTGTAGATCTTGGTGAGGATCAACGGCTGAAAAATCTTTTATGGATTGATGCTAAAAGTAGGCATGACTATGTAAACTTTTGTGATGTAGTTTCTTTTGACACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTTAATCAGCACTATCAATTTATATTGCTTGGGTCTGCCTTAATATCAGATGAAAGTGCTGCTACTTATTCTTGGCTAATGCGGACATGGCTGAAAGCAGTTGGCGGTCAAGTTCCAAAAGTCATAATTATTGACCATGACAAGACTTTAAAGTCAGTTATTTTAGATGTCTTTCCTAATGCTCATCATTGTGTGTGCTTATGGCATATATTAGGAAAGGTTTCTGAAAATTTGGCTCATGTCATTAAGCGACCTGAGAATTTTATGGCAAAATTTGAAAAATGCATCTATAGGTCATGGACAAGTGATGAATTTGAGAAGAGGTGGTGGAAAATTGTTGATAGGTTTGAGCTCCGAGAAGATGAATGCATGCAGTCATTGTATGAAGATCGCAAGTTATGGGTGCCAACATACATGAGGGACGTTTTCTTAGGTGGTATGTCTACTGTCCAGCGATCTGAAAGTGTGAATTCCTTCTTTGATAAGTATGTTCATAAGAAGACATCAGTGCAAGATTTTGTCAAACAGTATGAAGCAATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGCAGATTCCGATACTTGGAATAAAGTGGCAACGTTAAAAACTCCTTCACCATTAGAGAAGAGTGTTGCAGGGAGTTATACACATGCAGTATTCAAGAAGATTCAAGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAAGCTGAAAGACAGGATGATACAGGCATTACCTACAAGGTTCATGATATGGAAAAGAATCGAGACTTCATAGTTGTGTTGAATCAAATTAAATCTGAGGTGTCTTGCATATGTAGGTTATTTGAATATAGAGGTTTTCTTTGTCGACATGCATTGGTTGTTCTTCAATATTGTGGCCTTTCAGTGATCCCATCCCAATATATTTTGAAACGGTGGACTAGAGATGCAAAGGCTGGACATATAATAGGAGAGGAATCTGAACATATGCTGGCTAGGGTGCAACGGTATAATGACTTATGTCAGCAAGCATTGAAATTGAGTGAAGAGGGATCTCTGTCTCAAGACAGTTATAGTATTGCATTCCATGCACTCCGTGAAGCATACAAAAGTTGTGTGAGTGCAAACAATTCTCGTAGAAGTCCTACAGAAGTTGGCACATCAGCTGGTCATGGTCAGCTTTCCACTGAAGAGGATACCCAAAGTAGAAATTTGGGGAAGACGAACAAAAAGAAGAATCCAACTAAAAAGAAAAAGCTGAACTCTGAGGCTGAAGTGATGACCGTTGGGGCACAAGATAACTTGCAACAAATGGACAAATTCAGCACTAGGGCAGTAACCCTTGATGGTTATTATGGCACTCAACAGAGTGTTCAGGGAATGTTGAACTTGATGGGACCAACACGTGACAATTACTATGGGAATCAACAGACGATTCAGGGGCTGGGACAATTAAGTTCCATACCACCGAGCCACGATGGGTATTATGGTGCTCATCAGAGCATGCCTGGTCTGGCACAGCTGGATTTTTTCCGGGCATCAACAGGTTTTGCTTATGGCATTCGGGATGATACGAATGCAAGACCGATGCAGTTGCATGAGGATCCATCAAGACATGCTTGA 2967 0.4028 MVVRGSCRWLAIVRRTMMVHGEVPGDVLHAYEVGRISLWNHVSRNTALFGVSCKPIKEWGFDHGNLLSVVGKWPWRFFLETSTLWHATGLELFFLLLDLFHLSSELDWRTWALDPSILFSRKSIFHFFTQSLCCTIKLRAVVAIMDIDLRLPSGGHDKEDEEPNTIANILDDEEKLHNGDLEGRNMVGTTVDIHALDGGDLNSPTVDMVIFKDDTNLEPLSGMEFESHGEAYSFYQEYARSMGFSTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQDAENSTGRRSCSKTDCKASMHVKRRPDGKWVIHSFVKEHNHELLPAQAVSEQARKMYAAMARQFAEYKTVVGLKNEKNLFDKGRNLGLESGDAKLLLDFFVQMQSMNSNFFYAVDLGEDQRLKNLLWIDAKSRHDYVNFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGSALISDESAATYSWLMRTWLKAVGGQVPKVIIIDHDKTLKSVILDVFPNAHHCVCLWHILGKVSENLAHVIKRPENFMAKFEKCIYRSWTSDEFEKRWWKIVDRFELREDECMQSLYEDRKLWVPTYMRDVFLGGMSTVQRSESVNSFFDKYVHKKTSVQDFVKQYEAILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGSYTHAVFKKIQVEVIGAVACHPKAERQDDTGITYKVHDMEKNRDFIVVLNQIKSEVSCICRLFEYRGFLCRHALVVLQYCGLSVIPSQYILKRWTRDAKAGHIIGEESEHMLARVQRYNDLCQQALKLSEEGSLSQDSYSIAFHALREAYKSCVSANNSRRSPTEVGTSAGHGQLSTEEDTQSRNLGKTNKKKNPTKKKKLNSEAEVMTVGAQDNLQQMDKFSTRAVTLDGYYGTQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPPSHDGYYGAHQSMPGLAQLDFFRASTGFAYGIRDDTNARPMQLHEDPSRHA 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1636 988 Pfam MULE transposase domain 432 524 IPR018289 -
Dere08g1636 988 Pfam SWIM zinc finger 721 747 IPR007527 GO:0008270
Dere08g1636 988 SMART 26again6 723 750 IPR006564 GO:0008270
Dere08g1636 988 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 213 821 IPR031052 GO:0006355
Dere08g1636 988 MobiDBLite consensus disorder prediction 276 305 - -
Dere08g1636 988 MobiDBLite consensus disorder prediction 824 850 - -
Dere08g1636 988 ProSiteProfiles Zinc finger SWIM-type profile. 712 748 IPR007527 GO:0008270
Dere08g1636 988 MobiDBLite consensus disorder prediction 824 870 - -
Dere08g1636 988 Pfam FAR1 DNA-binding domain 233 335 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1636 Dere-ChrDere08 21863699 21872039 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere08g1636 FAR1 7.6e-28 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1636 08 21863699 21872039 Dere07g1477 07 19604783 19613916 CCT