Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1632 ATGTCTTCCTATGGCAAAGTCAACGAGTTCGAGCAAGCCAGGCTCGAAGCTCGCCGGAAAACCCGCAGGCGAATCGCCGTCATAAGCTTGTCTGCCATAGTCCTCGTTGGCGTTGTGGTGGCCGCTGTGCTGGGAACAACTTCTGCTCACAACAATGGCGACAACAATAGTAACAGTGATGCTAAGTCGTCAGCTCTTTCTGCTTCTGTGAAAGCTGTGTGTGATGTGACACTGTACAAGGAAGCTTGTTATGCCAGCCTTGGGCCTCTTGTTCAATCAAGCCAGGTTATCAAGCCTGAGGATCTGTTCAAGTTGTCGATTCAGGTGGCGTTGAACGGGGTCTCTAAAGCTGCTGATAAGTATTTCTCTGATGATGATAATGGAGTTTTCAAGGGCTTCATTAGTGATAATAGGACCAAGGAGGCTTTGAATAATTGCAGGGAGCTTCTGGGTCTTACTGTTGATCATCTGAACAGCTCATTAGCCTCTGGGGAGAAATCTTCACTTCTTGAGGTTTTTGAAGATCTTCAGACATGGCTGAGTGCTTCAGGAACATACCAACAGACATGCATAGATGGCCTTGGGGAAGCAAAAGCTTCACTAAAGAACAGCGTTACAAGCTATCTCAAAAACTCCACAGAGTTCACCAGCAACAGTCTCGCCATCATCACATGGATCAACAAAGCTGCAAGCACACTGAACCTGAGACGCCTATTAACCCTACCAAATCAGAACGAAGCACCAGGATGGCTTCATCACAAAGACAGAAAGCTGCTTCAAACAGATAGAGAATTGAAGGCGAAAGCAGACATTGTTGTGGCCAAAGATGGCACAGGAAAGTACAAAACAATCACTGAAGCACTCAAGCATGTCCCTGAGAAGAGTGCCAAGAGGACTGTGATCTACGTGAAGAGAGGGGTTTACTATGAGAATGTGAGAGTAGAGAAGACCAAGTGGAACGTCCTGATGATTGGTGATGGAATGACCAGAACAATTGTGTCTGGTAGCCGCAACTTTGTGGATGGCACTCCAACTTTCTCAACTGCAACATTTGCTGTTTTTGGGAAGAACTTCATGGCAATGGACATGGGATATCGGAACACGGCGGGGCCGCAGAAGCACCAGGCAGTAGCACTGATGACAAGTGCAGATCAGGCAGTGTTCTACAGATGCCAGATTGATGCGTTCCAGGACTCTCTCTATGCTCATTCACAAAGACAGTTCTACAGGGAATGCAATATCTATGGCACTGTTGATTTCATCTTTGGCAATTCTGCTGTTGTCATCCAAAATTCCAACATTCTCCCAAAGGAACCTATGAAGGGCCAGCAGAACACAATCACAGCACAAGGAAAGATTGACCCTAACATGAACACAGGAATTTCAATTCAGAACTGCAATATCTCGCCCTTTGGGAACTTAAGTGCTGTGCAAACATACCTTGGAAGACCATGGAAGAACTACTCAACCACTGTGTACATGCAGTCTTCAATGGGAAGCTTCATTAACCCTAGTGGTTGGTTGCCATGGGTAGGAAACTCAGCACCAGACACCATTTTTTATGCAGAGTTTCAGAATTATGGACCTGGTTCTTCAACAAAAGATAGGGTCAAATGGAAGGGTTTGAGGAAAATTACTGTTAGAGAAGCTGCTAGATACACTGTCAAGCCCTTTCTTCAGGGAGACCGATGGATTCCGGCATCCCGCGCCCCCTACAAGTCTTACCTGTGA 1731 0.4627 MSSYGKVNEFEQARLEARRKTRRRIAVISLSAIVLVGVVVAAVLGTTSAHNNGDNNSNSDAKSSALSASVKAVCDVTLYKEACYASLGPLVQSSQVIKPEDLFKLSIQVALNGVSKAADKYFSDDDNGVFKGFISDNRTKEALNNCRELLGLTVDHLNSSLASGEKSSLLEVFEDLQTWLSASGTYQQTCIDGLGEAKASLKNSVTSYLKNSTEFTSNSLAIITWINKAASTLNLRRLLTLPNQNEAPGWLHHKDRKLLQTDRELKAKADIVVAKDGTGKYKTITEALKHVPEKSAKRTVIYVKRGVYYENVRVEKTKWNVLMIGDGMTRTIVSGSRNFVDGTPTFSTATFAVFGKNFMAMDMGYRNTAGPQKHQAVALMTSADQAVFYRCQIDAFQDSLYAHSQRQFYRECNIYGTVDFIFGNSAVVIQNSNILPKEPMKGQQNTITAQGKIDPNMNTGISIQNCNISPFGNLSAVQTYLGRPWKNYSTTVYMQSSMGSFINPSGWLPWVGNSAPDTIFYAEFQNYGPGSSTKDRVKWKGLRKITVREAARYTVKPFLQGDRWIPASRAPYKSYL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1632 576 FunFam Pectinesterase 66 227 - -
Dere08g1632 576 SUPERFAMILY Pectin lyase-like 267 572 IPR011050 -
Dere08g1632 576 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Dere08g1632 576 NCBIfam pectinesterase inhibitor domain 63 226 IPR006501 GO:0004857
Dere08g1632 576 SMART PMEI_2 65 222 IPR006501 GO:0004857
Dere08g1632 576 CDD PMEI-like_3 72 228 - -
Dere08g1632 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 227 IPR035513 -
Dere08g1632 576 PANTHER PECTINESTERASE 36 566 - -
Dere08g1632 576 Gene3D - 265 576 IPR012334 -
Dere08g1632 576 FunFam Pectinesterase 264 576 - -
Dere08g1632 576 Pfam Pectinesterase 270 562 IPR000070 GO:0030599|GO:0042545
Dere08g1632 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 226 IPR035513 -
Dere08g1632 576 Pfam Plant invertase/pectin methylesterase inhibitor 69 222 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1632 Dere-ChrDere08 21748440 21752110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1632 2 576 Carbohydrate Esterase AT3G10710 56.153 0.0 677