Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1607 ATGACGGACCTCCCTTGTGCCCCTAGGTTCCGTTCAAGATCGAAGTCTTCGCCTTCTTGCTTGTTATTCCTGCTTACTTGCTGCACAAGTGGAGAAGAAGATGGAAGACGAGAGAGGTCTTATGCACTCACAAAGGCTGGCTGGCTGCACTTGGATGAGTTTATCCTAGAAGGTGATGGAAGTTTATTCGAAAATCTCCATGGGATGAATATATGTGACTATATGTCCAGGGACTCATACATGAGTGAGAAGTTTAACAAGGCAATGGGTGATTTGTCCAAAAGTATCATGAGAAGAGTGCTTCATATATACAAAGGATTTGAGGGACTGACTTCTTTAGTTGACTTCAATAATGGAAATACAGAGAGTGAAGAAGGAGATTTGATCTTGAGCATACCAAAAGTTGATGCCATTCTGATGAAGTTTGTATGTGAAATTTGGACTGATGAACAACCCTTGAAGCTTCTCAAGAACTGCCATAAAGCATTGAAGGAAAATGGCAAAGTCATTGTAATCAGCTTTGTGATGCCAGTGGAAACAGAGGACAGTGTAGCTGCTAAATGTGTTTCAAGCATGGGATGTTGCTATGTTTATGCAGAATGA 603 0.4129 MTDLPCAPRFRSRSKSSPSCLLFLLTCCTSGEEDGRRERSYALTKAGWLHLDEFILEGDGSLFENLHGMNICDYMSRDSYMSEKFNKAMGDLSKSIMRRVLHIYKGFEGLTSLVDFNNGNTESEEGDLILSIPKVDAILMKFVCEIWTDEQPLKLLKNCHKALKENGKVIVISFVMPVETEDSVAAKCVSSMGCCYVYAE 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1607 200 Pfam O-methyltransferase domain 122 189 IPR001077 GO:0008171
Dere08g1607 200 Pfam O-methyltransferase domain 48 119 IPR001077 GO:0008171
Dere08g1607 200 PANTHER O-METHYLTRANSFERASE 41 186 IPR016461 GO:0008168
Dere08g1607 200 Gene3D Vaccinia Virus protein VP39 123 194 IPR029063 -
Dere08g1607 200 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 46 184 IPR029063 -
Dere08g1607 200 Gene3D Vaccinia Virus protein VP39 39 120 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1607 Dere-ChrDere08 21367668 21371968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1607 48 181 Monolignol Biosynthesis Gene Families AT1G77520 35.329 9.00e-30 111