Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1595 ATGGCCACTGAAAAGCTTCGATGCTGTGGCAACTTCCTTGAGAGCTCAAAACCCTACTTTGCCATGATCTCTTTACAGTTTGGGTACGCTGGCATGAACATTATCACTAAGGTTTCACTCAACCAAGGGATGAGCCACTATGTGCTTGTGGTTTATCGCCATGCTTTTGCCACTGCTGTTATTGCTCCCTTTGCCTTCATTTTTGAAAGGAAAGCTCAACCAAGAATAACGTTCAAACTTTTCATGCTAATTTTCCTCCTTGCTCTTCTTGGGCCTGTGATTGATCAGAATTTCTACTATGCTGGGTTGAAATTTACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCTGCCATGACTTTTGTGATGGCAGTTTTATGCAGGATGGAAAAGATCAATATGAAAAAGGTGAGATGCCAAGCGAAGGTAGTGGGAACCTTAGTGACAGTGGCTGGGGCCATGTTGATGACACTGTACAAAGGCCCTATTGTGGAGATGGCGTGGACCAAACATGTCCATTCCCCTCACAAAACCTACTCTTCAGGTCCCACTTCTTCTCCTTCCTCTGACAAAGACTGGTTCGTTGGCTCCATCTTCCTCATCATTGCCACTCTTGCCTGGGCTTCCCTCTTTGTTCTTCAAGCCAAAGTCCTTGAGACTTACAAGAACCATCAGCTAAGTCTCACATCACTTATGTGCTTCATAGGCACTCTTCAGGCTGTTGCTGTTACATTTGTTATGGAGCACAACCCCTCTGTGTGGAGAATCGGCTGGGATTTGAACTTACTTGCTGCAGCCTATGCTGGGATTGTGACTTCAAGCATATCTTACTACGTTCAAGGGTTGGTGATTAAGAAGAAAGGACCTGTCTTTGCCACTGCCTTTAGCCCTTTAATGATGATAATTGTAGCCATCATGGGCTCCTTCATCCTTTCAGAAAAAATTTATCTTGGAGGTGTGATTGGCTCCATCTTGATAGTTAAAGGGCTATACTCAGTTCTATGGGGTAAACACAAAGATACTGTGGAGAACAAAGTGGCAGATCAAGAGATGCCTCCATTGCCTCTAAAGGGTGCTTATGTTGATAGAAATGCAGATCTTGCAGATGAATTCACTGAACAAAAATCAGAGAAAGTTACAGAACCCAATAATAAGAACCTCTCTTCTGTTGTTATAAGCATGCCTATCATCCCTGAACCTCCCATGAAAGCCAATGAGGCAAAGGCTTAA 1236 0.4385 MATEKLRCCGNFLESSKPYFAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFIFERKAQPRITFKLFMLIFLLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVLCRMEKINMKKVRCQAKVVGTLVTVAGAMLMTLYKGPIVEMAWTKHVHSPHKTYSSGPTSSPSSDKDWFVGSIFLIIATLAWASLFVLQAKVLETYKNHQLSLTSLMCFIGTLQAVAVTFVMEHNPSVWRIGWDLNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILSEKIYLGGVIGSILIVKGLYSVLWGKHKDTVENKVADQEMPPLPLKGAYVDRNADLADEFTEQKSEKVTEPNNKNLSSVVISMPIIPEPPMKANEAKA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1595 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 341 - -
Dere08g1595 411 PANTHER WAT1-RELATED PROTEIN 17 343 IPR030184 GO:0016020|GO:0022857
Dere08g1595 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Dere08g1595 411 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Dere08g1595 411 Pfam EamA-like transporter family 198 336 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1595 Dere-ChrDere08 21223487 21226518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1595 1 398 Nodulin-like Gene Family AT5G07050 69.000 0.0 560
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1595 08 21223487 21226518 Dere08g1595 08 21223487 21226518 ECH