Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1592 ATGGCTTCCACAGAGAATCCTGTAAAGGACAAAGCAGATCATCCTGTAGAAGACAAAGCAGATCATGCTGTGGAGAACAAAGCAGATCATCCTGGGGAGAGCAAAGCAGATCATCCTGTAGAGGACAAAGCAGATCATGCTGTCAAGGATAAAGCAGATCATGCTGGCAAGGATACAGCAGATAATTCTGTCAAGGATGAAGCAGATCAACCCGTAAACAACACAACAGATAATCCTGTAAAGAACAAAGCAGATGATCTTCCGGAAGAAGCAAAGGCTCTCTTAAAATCACTAGCCAGTAAATGGGATGATATACAAGATGCAGATGCATTGCAGGTGATCCCTCTCAAGGGGGCAATGACTAATAAGGTATTCCAAATAAAATGGAAGACAAAGACAGGGGAAACCTCGAGAAAAGTTATTGTTAGAATCTATGGTGAGGGTGTGGAGAATTTCTTTGATAGGGATGATGAGATACGGACATTTGAATTCTTGTCTAAGAATGAGCAAGGACCTCGTCTTCTAGGACGGTTTGCCAATGGTCGGATTGAAGAGTTCATCAAAGCGCAGACTCTATCAGCATCTGATCTGCGTGACCCGTCTATCTCAGCTCTTGTAGCAGCCAAAATGAAGGAGTTCCATGATCTTGATATGCCTGGTCCAAAGAAAGTCAACCTATGGGATAAATTGCGAAAATGGATAAGTATAGCCAAGGGTTTGTCTTCCCTTGAAGAAGTTGAAGCCTTTTATTTGGACACAATTGACAAGGAAGTTGACATATTGGAAAAGGAACTCTTAGGTGCTCAACCATGCATAGTGTTCTGCCACAACGATTTGCAATATGGGAACATAATGCTTAATGAAGAGACAAATTCTGTGACCCTAATTGATTATGAATATGCAGGTTATAACCCTGTAGCATATGACATCTCAAATCACTTCTGTGAGATGGCTGCTGATTATCATACAGAAACGCCTCACATTCTTGATTTCAATAAATATCCTGATTTGGAGGAGCGCAAAAAGTTTGTGCATGCATATTTGAGTACTTCAGGCCAGCAACCTAATGACAGTGAAGTAGAGCAGCTACTTCAAGAAGTTGAGAAGTTTACACTTGCAAGTCATTTATTCTGGGGTGTCTGGGCGATAATTTCGGCACATGTAAACAAAATCGACTTTGACTACATGGAGTATGCTAGACAGAGAATTAAAGAGTACTGGTCAAGGAAACCTTATCTTTTGTGCTCTGCTGGGCCTTCCCTTGAAAATATAGTCACTGACGGTAATAAAACTTAA 1296 0.4113 MASTENPVKDKADHPVEDKADHAVENKADHPGESKADHPVEDKADHAVKDKADHAGKDTADNSVKDEADQPVNNTTDNPVKNKADDLPEEAKALLKSLASKWDDIQDADALQVIPLKGAMTNKVFQIKWKTKTGETSRKVIVRIYGEGVENFFDRDDEIRTFEFLSKNEQGPRLLGRFANGRIEEFIKAQTLSASDLRDPSISALVAAKMKEFHDLDMPGPKKVNLWDKLRKWISIAKGLSSLEEVEAFYLDTIDKEVDILEKELLGAQPCIVFCHNDLQYGNIMLNEETNSVTLIDYEYAGYNPVAYDISNHFCEMAADYHTETPHILDFNKYPDLEERKKFVHAYLSTSGQQPNDSEVEQLLQEVEKFTLASHLFWGVWAIISAHVNKIDFDYMEYARQRIKEYWSRKPYLLCSAGPSLENIVTDGNKT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1592 431 Gene3D - 146 407 - -
Dere08g1592 431 MobiDBLite consensus disorder prediction 1 85 - -
Dere08g1592 431 Pfam Choline/ethanolamine kinase 137 338 - -
Dere08g1592 431 PANTHER CHOLINE/ETHANOALAMINE KINASE 74 414 - -
Dere08g1592 431 Gene3D Phosphorylase Kinase; domain 1 98 186 - -
Dere08g1592 431 SUPERFAMILY Protein kinase-like (PK-like) 88 413 IPR011009 -
Dere08g1592 431 MobiDBLite consensus disorder prediction 7 65 - -
Dere08g1592 431 MobiDBLite consensus disorder prediction 66 81 - -
Dere08g1592 431 CDD ETNK_euk 111 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1592 Dere-ChrDere08 21168277 21171555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1592 76 417 Acyl Lipid Metabolism Gene Families AT1G74320 63.450 5.24e-170 479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1592 08 21168277 21171555 Dere07g1761 07 27948925 27956381 CCT
Dere08g1592 08 21168277 21171555 Dere08g1592 08 21168277 21171555 ECH