Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1563 ATGAAAGCTGCGCTCGCGACTGTGAAATTTATCCTAAGATTTCGTGCTCCCAGGTTGAAAATGTGTGTGATTTTGAATGGAACTTATTGTTTTGGCTCAGGAATGGCTCCTAAACAACCAAGCACGGGTTTGTTTGTCGGATTGAACAAGGGGCACGTTGTGACCAAGAAGGAAGTGGCTCCACGCCCTTCAGATCGCAAAGGGCTTTTGAAAGTAGGGAAGGACAAGCGAGCCCTGAAAGTCGCAAAGAGAAAGCTAGGTACCCATAAGAGGGCTAAAAAGAAGCGTGAGGAGATGTCAAGTGTTCTCCGAAAGATGAGGTTGGCCTATGCTCTTTTGTTCAAGTTATCATTGTATCCACGTTCAAGCATTGCATGGGAATCATGTTTTTGA 393 0.4529 MKAALATVKFILRFRAPRLKMCVILNGTYCFGSGMAPKQPSTGLFVGLNKGHVVTKKEVAPRPSDRKGLLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRLAYALLFKLSLYPRSSIAWESCF 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1563 130 PANTHER 60S RIBOSOMAL PROTEIN L36 69 109 IPR000509 GO:0003735|GO:0005840|GO:0006412
Dere08g1563 130 Gene3D 60S ribosomal protein L36 59 111 IPR038097 -
Dere08g1563 130 Pfam Ribosomal protein L36e 69 107 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1563 Dere-ChrDere08 20703356 20709655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1563 35 107 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 61.386 8.89e-32 107