Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1557 ATGGAGGACAAAGAACCCAACCATGATCAGACCCAGAACCCAAACCACAACCACAATCATAATCATCCTTCTCTTCCTAACCCCACCAAAGAAGAATCTCCGAGAAAGCCCGTTGGTGGCGGCGGCGGAGGTGATCGGTTGAAGAGGGATGAGTGGAGTGAAGGAGCTGTGTCGACGCTTCTGGAGGCGTACGAGGCCAAATGGGTGCTGCGGAACAGAGCCAAGCTCAAGGGCCATGACTGGGAGGACGTGGCGAGGTACGTGTCGTCACGCGCCAACTCCACCAAGTCGCCGAAGACGCAGACTCAGTGCAAGAACAAGATCGAGTCCATGAAGAAACGGTACCGTTCCGAGTCCGCAACCGGCGACGCTTCCTCGTCTTGGCCTTTGTATTCGCGCCTTGATCTTCTGCTACGTGGGACTGGGCCGCCTGCATCCGCCACCGCGCCGGGGATGCCGCCTTCCTCCACGGTGGCGGGGGCGGCGTCACACTCCGGGAATAACCAAGGTTTGATGTTATTGGAGTCACCCTTGGCGGTGCCTCAGCCTCTTCATCAACCTCCGCCACCTCCGGTGGCTACCGGCGCTCCTCCTCCTCCAATTGCCAACGCTCAAAACTCTCATGGATCCAATGGCTTTGATAGGTTAGCCAAGGAAGATGGGTTAGATACTAACAAGTCATCAGATCAAGTGTCCAACAAGAACAATGCAATACTGGACACAGATAGCAGCACCCCAGCTCTCTACAGCCATTCAAAGGAGCACCAAACAAGAAGCAACAACAACAACAACAAGAGGAAGATGAAGAAGATGGATCATCAGAGCAACATGAAGAAGAAGAGACTAAGGAACAAAGAAGAGAATGGCAATGACATGGGGATTGCAGAGAGCATAAGGTGGCTGGCAGAAGTGGTGGTGAGGTCAGAGCAGGCAAGAATGGACACAATGAAGGAGATTGAGAGGATGAGGGTTGAAGCAGAGGCCAAGAGAGGAGAAATGGATCTTAAGAGAACTGAGATTATTGCCAATACCCAGCTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAATAAAGGTGTTGATTCCTCACTGAGAATTGGTAGGAGTTGA 1110 0.5225 MEDKEPNHDQTQNPNHNHNHNHPSLPNPTKEESPRKPVGGGGGGDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARYVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATGDASSSWPLYSRLDLLLRGTGPPASATAPGMPPSSTVAGAASHSGNNQGLMLLESPLAVPQPLHQPPPPPVATGAPPPPIANAQNSHGSNGFDRLAKEDGLDTNKSSDQVSNKNNAILDTDSSTPALYSHSKEHQTRSNNNNNKRKMKKMDHQSNMKKKRLRNKEENGNDMGIAESIRWLAEVVVRSEQARMDTMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIGRS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1557 369 MobiDBLite consensus disorder prediction 181 198 - -
Dere08g1557 369 MobiDBLite consensus disorder prediction 158 172 - -
Dere08g1557 369 MobiDBLite consensus disorder prediction 226 257 - -
Dere08g1557 369 FunFam Trihelix transcription factor ASIL2 52 117 - -
Dere08g1557 369 MobiDBLite consensus disorder prediction 142 290 - -
Dere08g1557 369 Gene3D - 52 117 - -
Dere08g1557 369 Pfam Myb/SANT-like DNA-binding domain 49 136 IPR044822 -
Dere08g1557 369 MobiDBLite consensus disorder prediction 12 28 - -
Dere08g1557 369 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 23 355 IPR044823 -
Dere08g1557 369 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1557 Dere-ChrDere08 20588924 20591219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1557 36 149 Trihelix Transcription Factor Family AT3G14180 38.462 1.04e-19 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere08g1557 Myb_DNA-bind_4 1.1e-19 CL0123