Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1555 ATGGAGGTTAAAAGGCGAACGGTTCGCTCCCTTGTGGGGAAGCTGAGCTCTGTTTCAGAGCAAACCCGGGACGATGCTCTGTGTGAGCTACGCCTGATGACCAAGCAAGACGCAGAAACCCGATCCGTGATCGCTGATTCCGGCGCGATTCCGTACTTGGTCGAGACCCTCTTTTCTTCTTCGCACGCTTCCCAAGAAAACGCCTCAGCGACGCTTCTTAACCTCTCGATCTCCTGCAGAGAGTCTCTCATGTCCACGCGCGGCGTCCTCAACGCGATCTCTTACGTGCTTTCCCGCCATAAATCGACTTCTTCTGCTTCCGCTGTCCAGTCCTCCGCCGCCACGTTGCACAGCCTCCTCGTCGTCGATAACTATAGACCCATCATTGGTTCGAAGCGTGACATTGTGTACGCGCTCGTGGATATCATCAAAACCCCCAAATCGCCAACCAGATCGGTCAAGGACGCTCTTAAGGCTCTGTTTGGAATCGCGCTTCACCCGCTTAATCGATACACGATGATCCAGCTCGGTGCGGTGGAATCTCTTTTCTCATTGATTTTGAAGGACCGGAGGGTCGGGATTGTGGAGGATGCTACGGCGGTGATAGCTCAAATCGCGGGTTGCGAAGAGAGTGAGGAAGCGTTTCGGAAGGTGTCGGGAATTGGAGTGCTGGTTGATCTTCTGGATATGGCAAATAAGTCGAGCATGAAGGCGAAGGAGAATGCCGTTTCTGGATTATTGAATCTAGTGAGGTGTGGAGGGGAGAAAGTAGCCATGGATGTGAGAGTGAGAGCTTTAGGTGCATTTGATGGGATTGCGGATGTGGAGGAGAATGGAAGCACCAAAGGGAAGAACAAGGCAGCTGCGTTATTGGCTGTGTTGCTCGATGAAGGAAGCCATGGGAATACACAAAGGGATACGCGGTTTGATTCCTTACCAAGTCAAGATTCATCAGCTTCTTTTAGTTTCTCTACTGATTCGTCTGATACTGTTGTGTAG 999 0.5155 MEVKRRTVRSLVGKLSSVSEQTRDDALCELRLMTKQDAETRSVIADSGAIPYLVETLFSSSHASQENASATLLNLSISCRESLMSTRGVLNAISYVLSRHKSTSSASAVQSSAATLHSLLVVDNYRPIIGSKRDIVYALVDIIKTPKSPTRSVKDALKALFGIALHPLNRYTMIQLGAVESLFSLILKDRRVGIVEDATAVIAQIAGCEESEEAFRKVSGIGVLVDLLDMANKSSMKAKENAVSGLLNLVRCGGEKVAMDVRVRALGAFDGIADVEENGSTKGKNKAAALLAVLLDEGSHGNTQRDTRFDSLPSQDSSASFSFSTDSSDTVV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1555 332 Gene3D - 2 306 IPR011989 -
Dere08g1555 332 Pfam Armadillo/beta-catenin-like repeat 39 76 IPR000225 GO:0005515
Dere08g1555 332 MobiDBLite consensus disorder prediction 305 332 - -
Dere08g1555 332 FunFam ARM repeat superfamily protein 2 299 - -
Dere08g1555 332 SUPERFAMILY ARM repeat 6 277 IPR016024 -
Dere08g1555 332 PANTHER U BOX DOMAIN-CONTAINING 7 294 - -
Dere08g1555 332 SMART arm_5 166 207 IPR000225 GO:0005515
Dere08g1555 332 SMART arm_5 37 77 IPR000225 GO:0005515
Dere08g1555 332 SMART arm_5 208 251 IPR000225 GO:0005515
Dere08g1555 332 MobiDBLite consensus disorder prediction 300 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1555 Dere-ChrDere08 20575618 20576616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1555 8 305 U-box Gene Family AT2G23140 35.880 1.05e-37 140