Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1532 ATGCTGTTGTTGGTCGGACAGACAGATGAAACAGATGAAACAGATGACGGCATTGATGTTCGGTCACGGACACGCTCGCGGTTGCCGTTTCAGGTTTTGCCTGAGAATCGAATCTCTGCAATCCCAAATCAAAACAGCAATTTCGCAACTATACAGCTGCCCTTAAGACATCGTCCCTGTTCTTCTGATCGTCCCATAAGGTCCGATAATTTTCCTACGTTCCAGGTAGAATCAGGGATCAAAATGCCAGATGTTCAGTCCCTTAATGATTTCCTCAATCAGCTTAAAAAACGTAAAATTGAAGGTTCCCAGGCCACGGCAAAGCAGACAGCTGAAGTGCTTCGGTCTGTGATTTCGCAACAGCGGGTGCCCCATACAAATCAGGCTGGAGCTCTGATTGATGCAGTAAGGGCTGTGGGGGAGCAGCTAATTGCTGCAAATCCTGTTGAGCTAGCTGTGGGCAATATTGTGAGGCGGGTTTTGCACATTATAAGGGAGGAGGACCTTTCCTTTGCAACAGATGGTATTGCTGGTTTGGGGCTATCAGCAGCAAGTGATGATGAAGATGATATGGAACGAGATGATCATCCTGTTCTATCTGCAGCTGCTGTTGCTGCAGCTGCAAGAAGCACCTTGCGGCCACCATCATTGCAAACTCTTCTAGAGGATATGCCTGATTCAGCTGCTGTGCCACACACGTCTTCCTCGGGGGGTGAATCTGAAGGAAAAAGTAGATCAGCTGACAAAGGTTCTCGAGGTCGGAAGCTGAAGCATGATGTCATTGAAGCTGTCAATGAACTTATTGTGGATATTGCCACCTGCCATGAACAAATAGCAGAGCAAGCTGTAGAACACATACATCAAAATGAGGTGATTTTAACACTAGGAAGTTCAAGAACAGTACTGGAGTTTCTCCGTGCTGCCAAGGAGAAAAAGAGATCATTTCGGGTATTTGTTGCTGAGGGTGCCCCAAGATATAAGGGACATCTCCTTGCAAAAGATTTGGCAGCAAGAGGCTTACAAACCACAGTAATTACTGATTCTGCAGTTTTTGCCATGATATCCCGAGTAAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTTATTGCCCCAGTTGGGTTGAATATGGTCGCACTAGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGGAGTCACAAGTTGTGTCCTTTGTATCCACACAATCCTGAGGTCTTGCTGAATGAGCTGAGGTCCCCTTCTGAACTACTTGACTTTGGAGAATTTTCAGATTGTATGGATTCTACAAGTGGCAATGGTTCCTCTCTTCATGTCGTCAACCCAACATTTGATTATGTACCACCAAAGCTTGTTAGTCTCTTCATCACTGACACAGGAGGGCATAACCCATCATACATGTACCGGCTCATAGCTGATTATTACTCTGCTGATGATTTGGTGGTGAAACGAAGACCTACTACAGGGAGTTAA 1491 0.4581 MLLLVGQTDETDETDDGIDVRSRTRSRLPFQVLPENRISAIPNQNSNFATIQLPLRHRPCSSDRPIRSDNFPTFQVESGIKMPDVQSLNDFLNQLKKRKIEGSQATAKQTAEVLRSVISQQRVPHTNQAGALIDAVRAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSFATDGIAGLGLSAASDDEDDMERDDHPVLSAAAVAAAARSTLRPPSLQTLLEDMPDSAAVPHTSSSGGESEGKSRSADKGSRGRKLKHDVIEAVNELIVDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLRAAKEKKRSFRVFVAEGAPRYKGHLLAKDLAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSTSGNGSSLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKRRPTTGS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1532 496 SUPERFAMILY NagB/RpiA/CoA transferase-like 84 485 IPR037171 -
Dere08g1532 496 Gene3D - 274 480 IPR042529 -
Dere08g1532 496 Pfam Initiation factor 2 subunit family 99 470 IPR000649 GO:0044237
Dere08g1532 496 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 86 487 - -
Dere08g1532 496 MobiDBLite consensus disorder prediction 227 255 - -
Dere08g1532 496 FunFam translation initiation factor eIF-2B subunit beta 274 481 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1532 82 488 Eukaryotic Initiation Factors Gene Family AT3G07300 82.195 0.0 627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1532 08 20213002 20229773 Dere08g1532 08 20213002 20229773 ECH