Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1529 ATGGCAGATTTAGTGGGTGGAGCATTTCTCTCTGCTACCCTTCAGGTGGCTTTTGAGAGATTGGCTTCTCATGATATACTTGACTACTTCCGTGGCAGAAAACTCAAGGATGGCTTGTTGAAAAAGCTTCACATCATCCTTATATCTATCAATCAAGTTCTTGAAGATGCAGAGCAAAGGCAGTACAGAAACCCCAATGTGAAGCAGTGGCTTGATGAGCTTAAAGATGCTGTCTTTATGGCTGAGGACCTGCTAGATGAGATTGCTACTGAGGCATCACGACAGAAGCTGGATGCTGAATTTGAACCCGTCACTGGTAAGGTACGGAACTTCCTAACCACTATCGTTAATCCATTTGACAAGGAAATTGAATCAAGGATCATAGAAGTGCTTGAAAACCTAGAATTCCTAGCAAAACAAAAGGATGCGCTAGGACTGAAGGAAGGCTTTGGTGCTGACAGTGATATAGGAGTAAGTAGGAAACTGTCAAATAAACTGCCAACTACATCTTTAATTGATGAATCTATCGTGTATGGTAGAGATGTTGATAGAGAAGAATTATCTCGGATTTTACTGTCACACAACAAGAGTGGCAACCAGCTACCTGTGCAAGTAATTACTATCATGGGTATGGGTGGGGTAGGTAAGACCACCCTCGCCCAGCTTGTGTACAATGACAAAAGGATGGAAGATCAATTTCAACTCAGAGCTTGGGTGTGTATTTCAGAAGAATTTAATGTTGTTCAAGTTACCAAAACAATTCTTCAAGCACTCGATTGTTCACCAAAAGGTTCTAATGACCTAAATCTGCATCAACTTCAATTAAGGGAGAGATTGATGGGGAAGAAATTTTTCCTTGTCTTAGATGACGTCTGGAATGAGAATCGTGCAAGTTGGGAGATCTTCCAAGCTCCTTTCAACTATGGAGCTATAGGAAGTAAGATTCTTGTAACAACTCGCAATAAAAAGGTGACATTAGTTATGCACTCTACACATATACATCATTTGAAGCCATTAGGAGAGGAAGATAGTTGGAAGCTATTTTCAAAGCATGCATTTAGTGACCAACATGGTGGTACAGATCCAAATCTCGTATCAATTGGTAGAAAAATTGTTAAGAAGTGTGGAGGATTGCCTTTAGCTATAAAAGCTTTAGGAAGTCTGTTGCACACAGAACTATCTCATCAGGAATGGGTTAAGATATTGGAAAGTGATATATGGCATTTATCAGAGGATGACAGCAACATAATTCCAGCTTTAAGATTGAGCTACCATTATCTACCATCAAATCTTAAGCGTTGCTTCTCTTTTTGCTCTATCTTTCCTAAAGATTACGAGATAGACAAGGATCTCTTAATCCAGTTGTGGATGGCAGAAGGTTTGTTGCATTCTTGTCAAAATGATCAAAGCCTCGAAGAAGTGGGCAATGAATTCTTCAATGATCTACAGTCAAGGTCATTTTTTGAACCATCAAGGTCCAGAAATGATCGCTACTTCATTTTGCATGACCTTTTGATTGATTTAGCAAAATCAGTGATGGGAGAATTTTGTTTTCTGCTAGATGGCAATTGTGTGCAAAATATTCCGACAAGGGCTCGTTACTTTTCATACTTGAGCACATATGATCTCAAATCTATAAACTTTGAGTATATTTTCAATTGTCACCAATTACGCAGTTTCCTGCCACTCAAGCTTAATAACTCCATAAGATGTGATTTGATGGTTAATCTATTTTCTAGACTTGCTCATCTCAAGTACTTACGAGTGTTGTCATTGTCTGGATACAACAATGTCAAAGAGCTTGTAGATGATATTAGCTATTTAAAGCATCTACGATATCTTGATATTTCTTTCACCTCAATTAAAGAGTTACCTAATTCAATCTGTTTGCTGATTAATTTGCAAACATTGAAATTAGTAAATTGTTGTCACTTGACTGAGCTACCATCAGATTTGCACAAACTTATCAATCTTCGTTATCTTGATTTGTGCGGGACTAGCATACAGAAGATGCCCAAGTATATGGGAAAGTTAAAACATCTTCAAATACTGACTCGTTTTGTTGTGGGAAAGCATAGAGGGTCTGATTTGAAGGAGTTAGGGAAGCTAAGCCATCTGAAAGGTACAATTTCAATTTTAATGCTTGACAATCTCATTGATCTTATGGATACCAAGGAGGCCAATATGAAAGAAAAGAAATATTTGGAAGAATTAGTGTTAGAATGGTGTAAAAACAATGAAGACTCACAGCGTGAAAGGTGCATATTGGAGTCTTTCCAGCCTAACAAGAATTTGAAAAAGCTCACTATTAATTACTATAACGGCACAAGATTTCCGAATTGGTTTGAGGCTCCTTATTTGCCCAACTTGGTGTCTCTTCAGTTGAGTGGAAGTAACAACTGTTTTTATTTGCCACCCCTTGGGCAGCTACCCTCTCTCAAGCAACTCCATATCTATAGGTTTATTGGAATAGAAGTGATTGGACCTGAATTTTATGGGGATTGTTCATCGAGTGCTCCATTTAGATCTCTTGAATGTTTAACATTTTCGCATATGAAACGATGGGAAGAATGGAATATATGTTGTGAACTTGAAAGTTTCCCTTGTCTTCAAGAGCTTCAAATATGGAATTGTCCCAATTTGCAAGAGTCCCTGCCTCAACTTCTTCCATCTTTGAAAAAGCTAAATATTAGTAACTGTGAAAATCTTGAGGCATCACTTCCCAAGGCCCTTCCCTTAGGCCAGCTAATGTTAAGCAATTGTAAGATTTCACTACAAGATGTGCCAACCAACTTGACATGCATTTCTATTTCCAGAATTAGAGTTGATGAGTCCTGCCTAAACCGTATCCTGCTCACTAACCCCTATCTTGAACACTTGCATCTGAGTAGCTGTGATGAACTTGTGTCATCTTCCATAGGTGAAATTGAAGTTTCTGCCCCCAAGCTTAATTCCATATTCTTTGATAAGATGAGTAATATGAAGTCACTGCCTGAGAAAATGCATACTATCTTTCCATCTCTTCATTCTTTGACGCTGTGGGATTGTCCAGAGCTAGAATCACTTCCCCAAGGAGGTTTGCCTTCAAGCCTTGTTGATCTTGCAATCATGCGTTGCCCCAAACTCTTTGCTTCCCGCATGAGCTGGGGTTTGCACAAACTCCATTCTCTGCTTCACTTCAGTTTCAGTGATGATTTAGAGAATGTGCAGTCATTCCCAGAGGAGACATTGCTGCCACCTAATCTTATGTCTCTCACCCTGAAAAATTGCTCAAATTTAAAATCGATAAATTACAAGGGTCTTCTCCACCTCAAGTTTCTTGAATCCTTATGTATATGGGATTGCCCACTACTGAGTCTCCAAGGCTTGCTAGAGTAG 3378 0.3896 MADLVGGAFLSATLQVAFERLASHDILDYFRGRKLKDGLLKKLHIILISINQVLEDAEQRQYRNPNVKQWLDELKDAVFMAEDLLDEIATEASRQKLDAEFEPVTGKVRNFLTTIVNPFDKEIESRIIEVLENLEFLAKQKDALGLKEGFGADSDIGVSRKLSNKLPTTSLIDESIVYGRDVDREELSRILLSHNKSGNQLPVQVITIMGMGGVGKTTLAQLVYNDKRMEDQFQLRAWVCISEEFNVVQVTKTILQALDCSPKGSNDLNLHQLQLRERLMGKKFFLVLDDVWNENRASWEIFQAPFNYGAIGSKILVTTRNKKVTLVMHSTHIHHLKPLGEEDSWKLFSKHAFSDQHGGTDPNLVSIGRKIVKKCGGLPLAIKALGSLLHTELSHQEWVKILESDIWHLSEDDSNIIPALRLSYHYLPSNLKRCFSFCSIFPKDYEIDKDLLIQLWMAEGLLHSCQNDQSLEEVGNEFFNDLQSRSFFEPSRSRNDRYFILHDLLIDLAKSVMGEFCFLLDGNCVQNIPTRARYFSYLSTYDLKSINFEYIFNCHQLRSFLPLKLNNSIRCDLMVNLFSRLAHLKYLRVLSLSGYNNVKELVDDISYLKHLRYLDISFTSIKELPNSICLLINLQTLKLVNCCHLTELPSDLHKLINLRYLDLCGTSIQKMPKYMGKLKHLQILTRFVVGKHRGSDLKELGKLSHLKGTISILMLDNLIDLMDTKEANMKEKKYLEELVLEWCKNNEDSQRERCILESFQPNKNLKKLTINYYNGTRFPNWFEAPYLPNLVSLQLSGSNNCFYLPPLGQLPSLKQLHIYRFIGIEVIGPEFYGDCSSSAPFRSLECLTFSHMKRWEEWNICCELESFPCLQELQIWNCPNLQESLPQLLPSLKKLNISNCENLEASLPKALPLGQLMLSNCKISLQDVPTNLTCISISRIRVDESCLNRILLTNPYLEHLHLSSCDELVSSSIGEIEVSAPKLNSIFFDKMSNMKSLPEKMHTIFPSLHSLTLWDCPELESLPQGGLPSSLVDLAIMRCPKLFASRMSWGLHKLHSLLHFSFSDDLENVQSFPEETLLPPNLMSLTLKNCSNLKSINYKGLLHLKFLESLCIWDCPLLSLQGLLE 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1529 1125 Pfam NB-ARC domain 203 403 IPR002182 GO:0043531
Dere08g1529 1125 PANTHER DISEASE RESISTANCE PROTEIN RP 51 883 IPR044974 GO:0006952
Dere08g1529 1125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 438 IPR027417 -
Dere08g1529 1125 Pfam Rx N-terminal domain 9 101 IPR041118 -
Dere08g1529 1125 Gene3D - 423 512 IPR036388 -
Dere08g1529 1125 ProSiteProfiles Leucine-rich repeat profile. 610 631 IPR001611 GO:0005515
Dere08g1529 1125 Gene3D Ribonuclease Inhibitor 554 935 IPR032675 -
Dere08g1529 1125 Gene3D - 19 127 - -
Dere08g1529 1125 FunFam Probable disease resistance protein At1g61300 165 332 - -
Dere08g1529 1125 PRINTS Disease resistance protein signature 887 903 - -
Dere08g1529 1125 PRINTS Disease resistance protein signature 278 292 - -
Dere08g1529 1125 PRINTS Disease resistance protein signature 375 389 - -
Dere08g1529 1125 PRINTS Disease resistance protein signature 205 220 - -
Dere08g1529 1125 Gene3D Ribonuclease Inhibitor 1025 1123 IPR032675 -
Dere08g1529 1125 SUPERFAMILY RNI-like 841 1119 - -
Dere08g1529 1125 SUPERFAMILY L domain-like 501 908 - -
Dere08g1529 1125 Gene3D - 339 422 IPR042197 -
Dere08g1529 1125 Gene3D - 159 334 IPR027417 -
Dere08g1529 1125 FunFam Probable disease resistance protein At1g63360 424 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1529 Dere-ChrDere08 20189443 20192820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1529 201 684 WRKY Transcription Factor Family AT5G45050 24.575 9.77e-13 70.9