Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1508 ATGAGAAGAGCCACTCTCTGTTACATCCCATTCTTTGTTTGTTTCATTTGGTACAGTTCAACACTGTCCACTGCGTACGGTGACCTCGATGCTCTGCTCAAGCTCAAAGTTTCCATGAAGGGACCGAGAGCTTCATCTTCTGCAATGGAGGATTGGAAGCCCTCTGCTTCTCTCTCAGCTCACTGCGATTTCTCTGGAGTAGCCTGCGACGAGAATTTCCGGGTAATCTCTTTGAACGTTACGTCCGTTCCCCTGTTCGGCTCTCTTCCCCCGGACATCGGCCTATTGGACAAGCTCGTCAGTCTCACTGTTGCACAGAACAAACTTACCGGCGAGCTCCCTAAAGAGCTCGCCAAGCTCACTTCTCTGAAGGTTCTGAACATCTCCCACAACGTCTTCAACGGAAGCTTTCCTGGTGATATCACTCGCAACATGACAGAGCTTGAGGTTCTAGACGCGTACGACAACAATTTCACGGGATTGTTACCGGAGGAGGTTGTGAAATTGAAGAAACTCCGGCAGCTCTGGCTCTCCGGGAACTACTTTTCCGGGGAGATACCGGAGAGTTATTCGGAGTTTGAGAGCTTGGAGATCCTGAGGTTGAACGAAAACGAACTCGGAGGGAAGATTCCAGCCAGTTTAGCGAAATTGAAGAAGCTCCGAGAATTGTATTTGGGGTATACTAATGCTTACCAGGGAGGTATCCCGCCGGAGCTTGGCACGATAAGCACGCTTGAACTTCTCGATTTATCTTCCTGTAATTTATCAGGCGAAATTCCGACGAGCTTGAGCAATTTGAAGAACTTGCATACTCTGTTTCTGCAAATTAACAATCTCACCGGAAACATTCCACCTGAACTCTCCGGTCTGATTAGCCTCAAATCATTGGATTTATCCATCAACGAGCTCACCGGAGAGATACCCTTGAGTTTCTCCAATCTACAGAACCTCACCTTGATCAATTTGTTTCAGAACAGTCTTCGTGGGGTTATCCCATCATTCATCGGCGACCTTCCTAACTTAGAAGTTCTTCAGGTTTGGGAGAATAATTTCTCGTTCATCTTGCCTGAAAATCTCGGAAAGAACGGGAAGTTTAAGATGCTTGACGTCGCGAAGAATCATTTCACCGGGCTGGTTCCTAAGGATTTGTGCAAAGGAGGAAAGTTGAAGACTTTCATTCTCATGGATAATTTCTTCTACGGTCCGATTCCTGAGGGGTTGGGTGACTGCAAATCACTGACGAAGATTCGAATTTCTGATAACTTCCTCAATGGGTCGATTCCTCCTGGGATTTTCAAGCTTCCTTCTTTGACGATAATGGAGCTCAGTAACAATAAATTCTCCGGGGAACTACCGTCGGATATTTCAGCTCATTTACTCGGAATTTTGTCACTTTCGAACAATTTATTCACCGGGAAAATCCCTCCGGCGATCAGCAACCTCCATGGCATGCAGACGTTATCACTGGACATGAACCAATTCGTTGGCGAGATTCCAGGGAAAATATTCGACTTGCCGATGCTGACAAAAATGAACATAAGCTCCAACAACCTCAGTGGTCCGATCCCAGTCTCCATCACTCGCTGTGCTTCCTTAACGGCCGTCGACCTCAGCCGGAACAATCTCAACGGAGAAATCCCGAAAGGAATCAAAAACATGATGGACCTAAGCATCCTCAATCTCTCAATGAACCACCTAACCGGCCCAATCCCAGGCGAAATCCGCTTCATGACGAGCCTCACCACCCTCGACCTCTCCGACAACAACCTCGCCGGCAGAATCCCCACGGGCGGCCAATTCAGCGTCTTCACGGGCGAGTGCTTCGCCGGAAACCCCAACCTCTGCTCCCCGCAAGACCGCACCTGCAAGACCATCCATCCCTTCCATTCCAAATCCACCAAAATCATCGTCACAATAATCTCGCTCGCCACCACCCTCCTCCTAATCCTCATCACAGTGTACACATTACGAAAGAGAAACCTCAACAAATCTATGGCATGGAAGTTAACCGCGTTCCAACGGCTAGACTTCAAAGCAGAGGACGTACTGGAATGTCTCAAGGAAGAGAACATAATAGGAAAAGGAGGAGCGGGGATCGTGTACCGGGGGTCCACCAGAGACGGCACCGACGTGGCTATAAAACGGTTGGTAGGTCAGGGAAGAAGCGGGAGGAACGATTACGGGTTCAAGGCGGAGATAGAGACGCTGGGGAGGATCAGACACAGGAACATAGTAAGGCTGTTGGGGTTTGTATCGAATAAGGACACGAACTTGCTGCTGTATGAGTACATGAACAATGGGAGCTTAGGGGAGTGGCTGCATGGCGCGAAGGGAGGGCACTTACAGTGGGAGGCGAGGTACAGGATCGCGGTGGAGGCGGCGAAGGGGCTGTGTTATCTGCACCATGATTGCTCGCCGGGGATAATACATAGGGACGTGAAGTCGAATAATATATTGCTGGACGGGGATTTTGAGGCGCACGTCGCGGATTTTGGTCTGGCTAAGTTTCTGCATGACTCTGGTGCTTCCCAGTCCATGTCCTCCATTGCTGGCTCCTACGGCTATATTGCTCCAGAGTACGCTTACACACTCAAAGTGGACGAGAAAAGCGACGTGTACAGCTTCGGAGTGGTGCTGCTGGAGCTGATAGTAGGGAGAAAACCGGTGGGAGAGTTCGGAGACGGTGTGGACATCGTGGGGTGGGTGAGGAAGACCACGTCGGAGCTATCTCCGGCGCCGTCGGAAGCGGCGGCTGTGCTGGCGGTGGTGGACACGAGGCTCACCGGGTACCCTCTGACAGGCGTCATTTATATGTTCAAGATAGCGATGATGTGCGTGCAAGAGTCTCACACCGCCAGGCCCACCATGAGGGAGGTCGTTCATATGCTCACTGATAATCATTCCTATGATCAGTCTCCTCCAAATCTGATTCAGCTGTAG 2940 0.5017 MRRATLCYIPFFVCFIWYSSTLSTAYGDLDALLKLKVSMKGPRASSSAMEDWKPSASLSAHCDFSGVACDENFRVISLNVTSVPLFGSLPPDIGLLDKLVSLTVAQNKLTGELPKELAKLTSLKVLNISHNVFNGSFPGDITRNMTELEVLDAYDNNFTGLLPEEVVKLKKLRQLWLSGNYFSGEIPESYSEFESLEILRLNENELGGKIPASLAKLKKLRELYLGYTNAYQGGIPPELGTISTLELLDLSSCNLSGEIPTSLSNLKNLHTLFLQINNLTGNIPPELSGLISLKSLDLSINELTGEIPLSFSNLQNLTLINLFQNSLRGVIPSFIGDLPNLEVLQVWENNFSFILPENLGKNGKFKMLDVAKNHFTGLVPKDLCKGGKLKTFILMDNFFYGPIPEGLGDCKSLTKIRISDNFLNGSIPPGIFKLPSLTIMELSNNKFSGELPSDISAHLLGILSLSNNLFTGKIPPAISNLHGMQTLSLDMNQFVGEIPGKIFDLPMLTKMNISSNNLSGPIPVSITRCASLTAVDLSRNNLNGEIPKGIKNMMDLSILNLSMNHLTGPIPGEIRFMTSLTTLDLSDNNLAGRIPTGGQFSVFTGECFAGNPNLCSPQDRTCKTIHPFHSKSTKIIVTIISLATTLLLILITVYTLRKRNLNKSMAWKLTAFQRLDFKAEDVLECLKEENIIGKGGAGIVYRGSTRDGTDVAIKRLVGQGRSGRNDYGFKAEIETLGRIRHRNIVRLLGFVSNKDTNLLLYEYMNNGSLGEWLHGAKGGHLQWEARYRIAVEAAKGLCYLHHDCSPGIIHRDVKSNNILLDGDFEAHVADFGLAKFLHDSGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWVRKTTSELSPAPSEAAAVLAVVDTRLTGYPLTGVIYMFKIAMMCVQESHTARPTMREVVHMLTDNHSYDQSPPNLIQL 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1508 979 SMART LRR_typ_2 481 505 IPR003591 -
Dere08g1508 979 SMART LRR_typ_2 290 313 IPR003591 -
Dere08g1508 979 SMART LRR_typ_2 434 458 IPR003591 -
Dere08g1508 979 SMART LRR_typ_2 338 362 IPR003591 -
Dere08g1508 979 SMART LRR_typ_2 145 168 IPR003591 -
Dere08g1508 979 SMART LRR_typ_2 266 289 IPR003591 -
Dere08g1508 979 SMART LRR_typ_2 577 600 IPR003591 -
Dere08g1508 979 SMART LRR_typ_2 120 144 IPR003591 -
Dere08g1508 979 SMART LRR_typ_2 193 217 IPR003591 -
Dere08g1508 979 Gene3D Ribonuclease Inhibitor 143 230 IPR032675 -
Dere08g1508 979 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 342 626 - -
Dere08g1508 979 FunFam Leucine-rich repeat receptor-like protein kinase 25 188 - -
Dere08g1508 979 Pfam Protein kinase domain 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1508 979 ProSiteProfiles Protein kinase domain profile. 686 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1508 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 238 964 - -
Dere08g1508 979 Gene3D Ribonuclease Inhibitor 27 142 IPR032675 -
Dere08g1508 979 Pfam Leucine rich repeat N-terminal domain 27 70 IPR013210 -
Dere08g1508 979 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 230 335 - -
Dere08g1508 979 SUPERFAMILY L domain-like 389 620 - -
Dere08g1508 979 Gene3D Transferase(Phosphotransferase) domain 1 764 973 - -
Dere08g1508 979 Gene3D Ribonuclease Inhibitor 348 625 IPR032675 -
Dere08g1508 979 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 764 976 - -
Dere08g1508 979 SUPERFAMILY Protein kinase-like (PK-like) 676 963 IPR011009 -
Dere08g1508 979 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 655 763 - -
Dere08g1508 979 Gene3D Ribonuclease Inhibitor 231 335 IPR032675 -
Dere08g1508 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Dere08g1508 979 Pfam Leucine rich repeat 531 590 IPR001611 GO:0005515
Dere08g1508 979 SUPERFAMILY RNI-like 77 421 - -
Dere08g1508 979 Gene3D Phosphorylase Kinase; domain 1 653 763 - -
Dere08g1508 979 Pfam Leucine Rich Repeat 245 266 IPR001611 GO:0005515
Dere08g1508 979 SMART serkin_6 686 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1508 Dere-ChrDere08 19960380 19964296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1508 25 965 Receptor kinase-like Gene Family AT1G75820 65.684 0.0 1253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere08g1508 Pkinase 1e-43 CL0016