Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1497 ATGGTTCAAAGAAAGGTGCCCAGCAAGGTTTTTATCCAAGCTGATCATGTTAAATCTGATAAGCGCTTGGCAAACTTGAAGCTGTCTTCTCAGCACCAAGATGGCAAAGGCAGTGGAGGTAATATAAATAAGTCAAGGTCAATTCTGCTTTCCGATTTGGAGGTTTCCCATTTATCACCTTCAAAAAGAAGCTTTTCCCAACTAGAAAAGCCACCACCTCTTCGTGTTCAAACCACTGCCACAACCCCACAAAATCAGCAGCCATTGATGAGAACAGATAGGTTACCCCATTACATGAAGCCCACCAGCAGTTCAGAAGCAAAGAAGGAGCTTTTTCCAGCAAGTCTTCAAAATACTCAATCTGATTCTGATCATAAGAATCAACTGCCAAAACTTTCCAGTAGTAGGAAAGCTAGCCCCATTCCTGGTAAGCAACCACCAAAATCTTTAAAAACACCATCAAGTCTGAAGTTGGCTAACACTTCAACAGAGAATCCGAGTTTTAAGCTTTCGAGAGCTTGTCCAAGAAAATCCTCCAGAGGAGCTCTGTTTGCAGAAATGAATGCACAAAAAGCTACCAGTTCTTCGAGTTTGAAGGACACATTGTTTCCCGCATGCCTTATGCTTAATCCTGAGGTTACTCAGTCAGACGGAACTTTATTTACGAAGGTTTGTCCATATACATTTTGCTCTCTTAATGGTCATCATCATGCACCTTTGCCTCCACTAAAGAGCTTCTTGTCGGCAAGGAGACATATTTTGAAGACCCAGAAGACCATGAAGCAGGAAGCACTAAGCCTTCGAAGATTGAAGGTGCCTTTTGAAACAAAGGATTCTGATATCGAGCACATTGCCGTTGATCGGCCTGCATGCAATGATGCAGAAATGGGTTTCTTTATTGAAATCTATGCTAAGTTAAAGGAAGATGAGGCAAAACCAACAGCAGCAGGTCATGAAGATGAAATGGGAGAACTAGAATCTTCTGAAGTGAATCATGAAATTGTTGAGTCTAGAATTGAGGACAATAGCATGGCTACAGGAGAGGATATTATCAAGCAGGTTAGCACAAGTATGTCTGATGAGTCCCCCGAGTCTGAGTCCAATTTTCAAAATGATTTCAAAAAATACTGTGATGATGTTGTAACTGAGGCAGATTTTCTTCAAGAACAAAATGCAGACCCAGCCCATGAAAACCACCCAAGTAACTGTTCTCCTGAAGATACAAGTATGGAAAGCTGCTGCAGTCAATTTAGCAATGATTTGGAACAATTGGACAGCAGTGAAATTGATGTTTCTGAAGCTACTGATACAGAGTGGAAGGAGGAACAAGTTTGCGCCTCCGAGCACAAAGAAGTGGTTTCAGCTGTCATGGCAGAGGAGAAAACTAAGTTCTTAGTTGAGTCTTTCTCAGAGAGTTCACTTGAGGTATTAATGAAGCCAGACAACATCCTTAGCAGCTGTTACAAGGACATTCTAGTAGAAGAAGCACTCCAAGAAGCCAATGGACAAAAATACGCCTGTCTAGAAGCACAACCTCATGGCACTGATTTAGACCTGGAAGGCACAAATGAAAGCATAGGGACTCAGGAAACTGGTTACATATACAATGACATCAGTTGTGACCAATGTTCTTCAATAGAGGATATATTTCAAGATTTGACGAGTGCACTAGAGAACGGAGGAAAATTTGAAACATTTGTGGATAACGAGGTCAATTGTGCCATAAAGGTACTTAATGATGGGCAGGAGCATATATCTCTAAAAGATAGTACCAGTATGCCACTGGGTGGCCAAATTAATGATGCTTCTGAAGAAGGATGTAAACTAAATCAGTTAGAAAGTGCAACTGATAAAGTTAGCAGGAACCAGGTGAAAAATACAGATATATTTAAAGACTTTTCCGAACAACTACTTGGAGGTACTGGTTATGAAAGTCAAGGTCAAAAGACGAGTGAACCACGCAAGATTGATGAGACCAATGAAGACAGAAACTCAAGTCCAGAGGCTGATGACGGAAGCATTAGCAAAGTGACACAATTTCAATTGATTGATGTACATGATGAAAAAATCAGTGCTGCTCAACACCAGGAATTGTTGGACAAAAAAGAAGGCGAAGCTGATAAGTTCCAGCGCACAAGCTGCACAGGTGGTGAAGAGCAGAAAACAAGCAAGAAATGGAGAGGACAATTGAGGCACAAGAAACCTGTCAAGGATGATGAGCAACTGAGGAGGTTCAACCAGCAAGAGCCAAACTTTCTGCCTTTGATTCCAGATCTGGAACCAGAAAAAGTTACTCTCAAACATCAGATGATGGATGAAAGAAAAAGTGCAGAGGAATGGATGCTTGATTATGCACTCAGACAAGCTGTCACCAAACTTGCTCCGGTGAGGAAAAGTAAGGTGGCATTGCTGGTTGAAGCTTTTGAAACAGTAATGCCAACGCCCAAATGGCAAACCCATATGAGAAATAGTTCAGCCTTTGCTCATGCAAGAAGTATTCAAGCTTTAAACGATGGATGTTTCTGA 2526 0.4145 MVQRKVPSKVFIQADHVKSDKRLANLKLSSQHQDGKGSGGNINKSRSILLSDLEVSHLSPSKRSFSQLEKPPPLRVQTTATTPQNQQPLMRTDRLPHYMKPTSSSEAKKELFPASLQNTQSDSDHKNQLPKLSSSRKASPIPGKQPPKSLKTPSSLKLANTSTENPSFKLSRACPRKSSRGALFAEMNAQKATSSSSLKDTLFPACLMLNPEVTQSDGTLFTKVCPYTFCSLNGHHHAPLPPLKSFLSARRHILKTQKTMKQEALSLRRLKVPFETKDSDIEHIAVDRPACNDAEMGFFIEIYAKLKEDEAKPTAAGHEDEMGELESSEVNHEIVESRIEDNSMATGEDIIKQVSTSMSDESPESESNFQNDFKKYCDDVVTEADFLQEQNADPAHENHPSNCSPEDTSMESCCSQFSNDLEQLDSSEIDVSEATDTEWKEEQVCASEHKEVVSAVMAEEKTKFLVESFSESSLEVLMKPDNILSSCYKDILVEEALQEANGQKYACLEAQPHGTDLDLEGTNESIGTQETGYIYNDISCDQCSSIEDIFQDLTSALENGGKFETFVDNEVNCAIKVLNDGQEHISLKDSTSMPLGGQINDASEEGCKLNQLESATDKVSRNQVKNTDIFKDFSEQLLGGTGYESQGQKTSEPRKIDETNEDRNSSPEADDGSISKVTQFQLIDVHDEKISAAQHQELLDKKEGEADKFQRTSCTGGEEQKTSKKWRGQLRHKKPVKDDEQLRRFNQQEPNFLPLIPDLEPEKVTLKHQMMDERKSAEEWMLDYALRQAVTKLAPVRKSKVALLVEAFETVMPTPKWQTHMRNSSAFAHARSIQALNDGCF 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1497 841 MobiDBLite consensus disorder prediction 311 330 - -
Dere08g1497 841 Coils Coil 692 712 - -
Dere08g1497 841 SMART CaM_binding_2 702 813 IPR012417 GO:0005516
Dere08g1497 841 MobiDBLite consensus disorder prediction 108 140 - -
Dere08g1497 841 MobiDBLite consensus disorder prediction 697 725 - -
Dere08g1497 841 MobiDBLite consensus disorder prediction 639 675 - -
Dere08g1497 841 MobiDBLite consensus disorder prediction 24 44 - -
Dere08g1497 841 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 813 IPR044681 GO:0005516
Dere08g1497 841 MobiDBLite consensus disorder prediction 394 411 - -
Dere08g1497 841 MobiDBLite consensus disorder prediction 650 669 - -
Dere08g1497 841 MobiDBLite consensus disorder prediction 391 411 - -
Dere08g1497 841 MobiDBLite consensus disorder prediction 60 173 - -
Dere08g1497 841 MobiDBLite consensus disorder prediction 148 169 - -
Dere08g1497 841 MobiDBLite consensus disorder prediction 60 91 - -
Dere08g1497 841 Pfam Plant calmodulin-binding domain 726 813 IPR012417 GO:0005516
Dere08g1497 841 MobiDBLite consensus disorder prediction 28 44 - -
Dere08g1497 841 MobiDBLite consensus disorder prediction 697 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1497 Dere-ChrDere08 19854019 19856544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1497 690 837 Calmodulin-binding Proteins AT2G38800 45.638 1.10e-29 123