Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1474 ATGTTTGCTGATTCCAAGGCTATTCCCTATGAATTTAATGAAAGCACTTCACATGTTCCAAAGCACCGAGCTCTCAGAAATGGTGATGCTTATCCTTGTCAACGAATTTATTGGATTTCAGAAGATGGACAGTCTATACAAGAGAAGAAGAAGAGAAGGAAATGGGTATCTTGTAGGCTGATGCTTAAGAGATTAACTCCAATTACTGCCACACAAAAGGAAACAACACCAAGTGGTGAAGCAGAGGAAGAACAGAGGAAGCATGCTTTAACTGTTAAAGAGAAATCAGCGGCCATCAAAATCCAATCTGCATTTAGGGGCTACCTAATTGATTCAAGCTGTAAAAACAGGTGGAATGACAGCATTTTGCTGAAGGAAGAGATAGATACGTCATGCATAAACAAGAAAGAAGCTGCTCTTAGAAGAGAGAGGATGAAACAATACTCATTTAACCATCGTATGTCTGCAGAAACAGAAAGAAAAAGAGTAAATGGAAGATGGAGGTATTGGCTAGATCAATGGGTAGATACACAACTTTCTAAAAGCAAAGAGCTTGAAGATTTAGACTCAGTTTTTAGCTCTCATTACAGAGGTAGTGAAGAAAATGGAGGAAGATCACTTTTGCTGAGAAATATTCAGAGAAAAAATCCGATTGAAGGGTTAAACTGTCACAGGAGGCAATGTTCAATGGGAGGAGGAGAAGATCGCTCATTTCCAAGCTCTCCTGTGATACCCACTTACATGGCAGTAACGGAATCAGCAAAAGCCAAAGCAAGATCCACAAGCTCTCCAAGAGTAAGGACATGGAATTTGGAGAACAATTATTCTGATCATAGCTATTCTCCATGCAAGAAAGTGATACCTCTTGTATCTTCTGTTAACAATAGTAGTGAGGTTCTCAGTGGTGGTAGGATGGGGAAGCTAAGTGGTAGTAATTACCAGCAAAGATCTCCAAGCTTAAAGGGTCTATCTTCTATGGCAAGTAAGGTTTTGTAA 996 0.3966 MFADSKAIPYEFNESTSHVPKHRALRNGDAYPCQRIYWISEDGQSIQEKKKRRKWVSCRLMLKRLTPITATQKETTPSGEAEEEQRKHALTVKEKSAAIKIQSAFRGYLIDSSCKNRWNDSILLKEEIDTSCINKKEAALRRERMKQYSFNHRMSAETERKRVNGRWRYWLDQWVDTQLSKSKELEDLDSVFSSHYRGSEENGGRSLLLRNIQRKNPIEGLNCHRRQCSMGGGEDRSFPSSPVIPTYMAVTESAKAKARSTSSPRVRTWNLENNYSDHSYSPCKKVIPLVSSVNNSSEVLSGGRMGKLSGSNYQQRSPSLKGLSSMASKVL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1474 331 Pfam Protein of unknown function (DUF4005) 238 307 IPR025064 -
Dere08g1474 331 Pfam IQ calmodulin-binding motif 96 109 IPR000048 GO:0005515
Dere08g1474 331 MobiDBLite consensus disorder prediction 298 331 - -
Dere08g1474 331 PANTHER IQ-DOMAIN 5-RELATED 115 286 - -
Dere08g1474 331 ProSiteProfiles IQ motif profile. 94 121 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1474 Dere-ChrDere08 19500156 19503347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1474 110 323 IQD Protein Family AT5G13460 47.511 2.47e-51 174