Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1464 ATGGATGATGGAGAAACTGAGCTTTCGGATAATTTCCTTTTGTCCAATCCGGAGTCATCTAGCAATGTTCAGGGTTCAACATCCATGAATATAATCAATGAATTCTTGAGGAACACCCGAACCTGCACCCACACTCACACTTGCAACCCTCCTGGTCCGGATGCAGCACATACCCATACATGCTATCACACCCACACCCAAGTTATTTCATCTGATGACAATGATCACCCAGATGATAAAGAACATACCAACTCAAAGCCAAAACGGCCTTCAGGGAATAGAGAAGCTGTCCGAAAGTATAGGGAGAAGAAAAAGGCACACACAGCTTACCTGGAGGAGGAAGTTAAGAAATTGCGTCTGCTGAATCAGCAACTAGTTAGGAAACTACAAGGACAGGCACTTCTTGAAGCTGAGGTTTTGAGGTTGAGGAGCATTTTGGTAGACCTCAAGGGGAAAATTGACAATGAGTTGGGTGCTTTCCCCTATCAAAAGCAGCGTAATAACTCTTCTTCAATCTTCAAGGAGGGGCATAATGATATAATGCCCACAGGTCATGCAACTGGTCTTCAGTGTCAGACCAATTTGAGATGCTTCGATCATCATGTAGGATCATCATCACGGGTTGATGTTTGTGGAAAAGAAAATTTTTTTATTCCATGTGAAGGAAACTGTCAACCTCCAGTTGTAAACTGTCAAGTAAACACAGATAACATGGCAAATACTGAAGGGCAAGTTGTGGACTCATTGGATAACTTGTTGTCACCTGCATCTCAAGCTGGGTAA 783 0.4304 MDDGETELSDNFLLSNPESSSNVQGSTSMNIINEFLRNTRTCTHTHTCNPPGPDAAHTHTCYHTHTQVISSDDNDHPDDKEHTNSKPKRPSGNREAVRKYREKKKAHTAYLEEEVKKLRLLNQQLVRKLQGQALLEAEVLRLRSILVDLKGKIDNELGAFPYQKQRNNSSSIFKEGHNDIMPTGHATGLQCQTNLRCFDHHVGSSSRVDVCGKENFFIPCEGNCQPPVVNCQVNTDNMANTEGQVVDSLDNLLSPASQAG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1464 260 MobiDBLite consensus disorder prediction 1 26 - -
Dere08g1464 260 Pfam Basic region leucine zipper 85 138 IPR004827 GO:0003700|GO:0006355
Dere08g1464 260 CDD bZIP 93 139 - -
Dere08g1464 260 SMART brlzneu 81 148 IPR004827 GO:0003700|GO:0006355
Dere08g1464 260 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 161 IPR031106 GO:0003700|GO:0006351
Dere08g1464 260 MobiDBLite consensus disorder prediction 69 99 - -
Dere08g1464 260 MobiDBLite consensus disorder prediction 9 26 - -
Dere08g1464 260 SUPERFAMILY Leucine zipper domain 88 130 IPR046347 GO:0003700|GO:0006355
Dere08g1464 260 MobiDBLite consensus disorder prediction 68 104 - -
Dere08g1464 260 Gene3D - 73 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1464 Dere-ChrDere08 19354609 19355391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1464 1 164 bZIP Transcription Factor Family AT2G16770 55.357 3.10e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere08g1464 bZIP_2 1.1e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1464 08 19354609 19355391 Dere08g1464 08 19354609 19355391 ECH