Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1462 ATGGCCGTTGAATTGGTTGGTGGTGCCATTCTCACCTCTTTCCTTCAGGTGGCTTTCGAGAAGTTGGCATCTCGTGATTTTCTTGACTTCTTCAGAGGCAGAAGACTGGACGAGACTTTGCTGAACAGGCTGAACATCTGTCTGTTATCCCTCAATGCTGTGATTGATGATGCAGAACAGAAGCAGATCACTAATCCGAATGTGAAAGCTTGGCTTGATGAGGTCAAAGATGCTGTGTACGATGCTGAGGATGTCTTAGATGAGATTGACTATGAAGTGACCAAGCGTAAGGTGGAGGCAGAATCCCAACCTAGTACTGTGACAAGCAAGGTACGAAATTTCTTCTCTGGTTCTGGTAGTTCATTTGACAAGGAAATGGAAACGAGGATGAAACAAGTCCTTGACAACCTAGAATATCTTGAGAGTAAAAAAGATATACTAGGACTGAAAGAAGGCAGATTTGCTCATGTAGGATCTGAAAGAAAGGTTCCAACAACATCTTTGGTGGACGAAGCCGGAATATATGGTAGAAATGATGACAAGAACATGATCATTCAGTGGTTGCTATCAGAAAATGATAACAGCAGTCACGTATCTATCATTTCGATAGTGGGTATGGGTGGGTTGGGTAAGACCACTCTTGCCCAGCTTATTTACAATGATGAGAGGGTCAAGGATGAATTTGAACTCTTAGCTTGGGTATGTGTTTCAGATGACTTTGATGTTACCAGGGTAACAAGAGCAATCGTCGAGGCAATAGTTATGTCCAATGACGATACTAAAGATCTAAATGTGCTTCAAGTTAAATTGAAGGGAATGTTAACTGGGAAGAAATTTCTTCTTGTTCTTGATGATCTTTGGAATGAAAGATATATGCAATGGGAGGCTTTACAAACGCCTTTCAATTATGGGGCTTCGGGAAGTAAAATTCTTGTAACCACCCGTAGTGACATAGTTGCTTCAACCGTTCACTCAGTTAAAAAGCATTCACTAAATCATTTAATAGAAGAAGATAGTTGGATGTTGTTCCAAAAAAATGCATTCCGTGATGGAGAAGCTCCCCATTCAAACTGTAATTTTGAAGAAATTGGCAGAAAAATTGTTAAAAAATGTAAGGGGTTGCCTTTGGCTTTAAAAACAATTGGGAGTCTATTGTATACAAAGTTCTCTATGGAGGAATGGAATGACATTTTGGAAAGTGAGATATGGGAGGAGGTGAGTGACATTCTCCCAGCTTTAAGATTGAGCTTTAATTACCTTCCTTCTATTCTCAAGAGATGCTTTGCTTACTGTTCGTTATTCTCCAAAGATTATGAATTTAGCAAGGAACAAGTAGTTCAGTTGTGGATGGCTGAAAATTTTTTACATTGCACTCAACAGAGAAAAGACATAAGAGAGGTAGGAGATAAGGTGTTTCATGATCTATTGTCGAGATCATTTTTTCAGCGATCAAGTGGAGATAAAACACTTTATGTCATGCATGACCTCATCAATGATTTGGCAAAGAATGCATCTGGAGACTTTTGTTTTAGGTTGGATGCTGATGAAGCACAAAATGTTTCCAGGAATACCCGCCACTTTTCATATGTTTCCCAGTTTTATTCTATTACTAGACAATTTGAAGGTATAAACAAGGCTAACAAATTGCGCACTTTCTTGAACTTTTGGACGTCTTCCCACTTGTCGATGTCTAGCAAGATAATCCAAGATTTTCTGTTCAAATTTAAGTGCTTACGTGTCTTATCTTTGTTAGGCTATTCAAACATTACTGTGTTACCAAGGTCACTAGGCGATCTTAAACATCTACGGTATTTGGATCTATCATATACTCGAATAACAGAACTACCAGATTCAATATGCTTACTTTATAACTTACAAACATTAAAGTTGCTGTGCTGCCGGTCTTTGAAAGAACTACCCTTGAATTTGCATAAACTCATCAATCTGCGTCATCTTGACTTTCAAGGAACTATGATTGAAAAGATGCCAAAGCAAATGGGAAAATTCAAACATCTTCAAGTTTTGCCATCATATTATGTGGGCAAATGTGGTGAGGCCAACATCAAACAATTAGGAGATCTTGATCTTCAAGGAACACTGGCCATTTTTGATTTGCAAAATGTGGTGTGTCCCATGGATTCCTTAGCTGCCAATTTGAAAAATAAAGTACACCTTGAGGAGCTAATGTTGGGGTGGAGTTTAAAGAATGAAGAATCACAGAATCAAAGGGATGTGCTGGATAATCTCCAACCTCCCCAGAACTTGAAAAAGCTATCGATTAGCAACTATGGTGACCCCAAGTTTCCAAATTGGATTGTGGATAATACATTGTCTAATGTTGTGTCCTTGGCATTGACCAACTGCAAATATTGTTCGTCCTTGCCATCGTTGGGTCTCTTGTCATCTCTCAAGTCACTATCAATTAAAGGATTTGATCTTATAGTGGCCATTGGTGTTGAATTTTATGGGAATAGCTCTTGTACTATTCCATTTGGATCCCTAGAAACATTGCGATTTGAGAAAATGTCTGGATGGGAGCAATGGAAATATGAGAATGTATCTGGTGCTTTCCCGCGTCTGCGTGAGTTGCATATACAAGAGTGTCCCAGGTTAAAGGAGCACATTCCTGGACAACTTCCTTCTTTAACGAAGCTAGTTATTATCAGGTGTGATGACCTTATGGCTTCAATTCCGTGCGCTCCAGCTATGCATGAATTGGTTCTAAGAAAATGTGGAAAGGTGCAATTGGAATATTTTCCATCAACTCTAAAAGTCCTCCGCATTACTGGACCGTTCACAGATTGCTTTTCTGTTAAAAAATTTGAGAATATGATTTCCAATACTTGCCTCGAAGAATTGGAAATTGTAGACTTTGCTACTCTAGAATTACCATTTCTTTGTGGTCATGAATTCCTTAAAAGAATGGAAATAGTAAGGAGCTGCGTCTCTCTAAGGACCTTGCCCCTTGATTTATTCCCTCAACTTCGATCACTGGAATTGTTTCTTTGTTGTAATCTTGAAGCGATATCTGTTTCTGAGGGACACGACCATCATCTCACTTCTCTTACAAATATGATAATCAGCCATTGCCCTAAATTTGCTTCATTTCCAAAGGGAGGATTGTCTGCCCCCAAATTGGAAGAATGTCATCTTACGAAATTGGAGAGTTTGAAATCACTGCCTGAGCGTATGCACATCCTCTTTCCCTCTCTGAGATTCCTATCTATAGAAGAATGTCCAAAAATGGATTCATTTTCTAAGGGGGGTTTGCCAACAAATCTAGACGTTCTTAGTATCTTCAATACCCCCATACTCATGGCTTCTCGAATGGAGTGGGATTTGCATAATCATACTTCTTTGCGATATTTCTGCATTCAAGATGTAGATGCTGAGTGTCTTCCTGAATCAGGATTATTGCCGCCTAATCTTACCAGGCTTGTTTTTTTTGAGTGTTCAAATCTTAGAACCTTGGATTATAAGGGTCTCTGCCACTTGTCCGCTCTTAAAGAGTTGACTCTTTACAACTGCTGTAAATTCCAATGCTTCCCAAAGGAGGGTTTGCCTAGCTCCCTTCGTACTCTCCATATTAGGGGATGTCCCTTGCTCAAAAAGCGGTGCCAAAAGCAAAAAGGGAAAGAGTGGTTAAAGATTGCTCACATCCCCTGCATTACTTTTGACGATGAATTACTGACTTGA 3696 0.3939 MAVELVGGAILTSFLQVAFEKLASRDFLDFFRGRRLDETLLNRLNICLLSLNAVIDDAEQKQITNPNVKAWLDEVKDAVYDAEDVLDEIDYEVTKRKVEAESQPSTVTSKVRNFFSGSGSSFDKEMETRMKQVLDNLEYLESKKDILGLKEGRFAHVGSERKVPTTSLVDEAGIYGRNDDKNMIIQWLLSENDNSSHVSIISIVGMGGLGKTTLAQLIYNDERVKDEFELLAWVCVSDDFDVTRVTRAIVEAIVMSNDDTKDLNVLQVKLKGMLTGKKFLLVLDDLWNERYMQWEALQTPFNYGASGSKILVTTRSDIVASTVHSVKKHSLNHLIEEDSWMLFQKNAFRDGEAPHSNCNFEEIGRKIVKKCKGLPLALKTIGSLLYTKFSMEEWNDILESEIWEEVSDILPALRLSFNYLPSILKRCFAYCSLFSKDYEFSKEQVVQLWMAENFLHCTQQRKDIREVGDKVFHDLLSRSFFQRSSGDKTLYVMHDLINDLAKNASGDFCFRLDADEAQNVSRNTRHFSYVSQFYSITRQFEGINKANKLRTFLNFWTSSHLSMSSKIIQDFLFKFKCLRVLSLLGYSNITVLPRSLGDLKHLRYLDLSYTRITELPDSICLLYNLQTLKLLCCRSLKELPLNLHKLINLRHLDFQGTMIEKMPKQMGKFKHLQVLPSYYVGKCGEANIKQLGDLDLQGTLAIFDLQNVVCPMDSLAANLKNKVHLEELMLGWSLKNEESQNQRDVLDNLQPPQNLKKLSISNYGDPKFPNWIVDNTLSNVVSLALTNCKYCSSLPSLGLLSSLKSLSIKGFDLIVAIGVEFYGNSSCTIPFGSLETLRFEKMSGWEQWKYENVSGAFPRLRELHIQECPRLKEHIPGQLPSLTKLVIIRCDDLMASIPCAPAMHELVLRKCGKVQLEYFPSTLKVLRITGPFTDCFSVKKFENMISNTCLEELEIVDFATLELPFLCGHEFLKRMEIVRSCVSLRTLPLDLFPQLRSLELFLCCNLEAISVSEGHDHHLTSLTNMIISHCPKFASFPKGGLSAPKLEECHLTKLESLKSLPERMHILFPSLRFLSIEECPKMDSFSKGGLPTNLDVLSIFNTPILMASRMEWDLHNHTSLRYFCIQDVDAECLPESGLLPPNLTRLVFFECSNLRTLDYKGLCHLSALKELTLYNCCKFQCFPKEGLPSSLRTLHIRGCPLLKKRCQKQKGKEWLKIAHIPCITFDDELLT 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1462 1231 Gene3D Ribonuclease Inhibitor 980 1224 IPR032675 -
Dere08g1462 1231 SUPERFAMILY L domain-like 905 1218 - -
Dere08g1462 1231 Gene3D - 155 329 IPR027417 -
Dere08g1462 1231 PANTHER DISEASE RESISTANCE PROTEIN RP 55 873 IPR044974 GO:0006952
Dere08g1462 1231 SMART LRR_typ_2 599 622 IPR003591 -
Dere08g1462 1231 SMART LRR_typ_2 646 669 IPR003591 -
Dere08g1462 1231 Pfam NB-ARC domain 178 427 IPR002182 GO:0043531
Dere08g1462 1231 PRINTS Disease resistance protein signature 371 385 - -
Dere08g1462 1231 PRINTS Disease resistance protein signature 273 287 - -
Dere08g1462 1231 PRINTS Disease resistance protein signature 597 613 - -
Dere08g1462 1231 PRINTS Disease resistance protein signature 200 215 - -
Dere08g1462 1231 Gene3D - 416 504 IPR036388 -
Dere08g1462 1231 ProSiteProfiles Leucine-rich repeat profile. 601 622 IPR001611 GO:0005515
Dere08g1462 1231 FunFam Probable disease resistance protein At1g63360 417 503 - -
Dere08g1462 1231 Gene3D - 333 415 IPR042197 -
Dere08g1462 1231 Pfam Rx N-terminal domain 11 103 IPR041118 -
Dere08g1462 1231 FunFam Probable disease resistance protein At1g61300 159 328 - -
Dere08g1462 1231 Gene3D Ribonuclease Inhibitor 536 931 IPR032675 -
Dere08g1462 1231 SUPERFAMILY L domain-like 492 894 - -
Dere08g1462 1231 Gene3D - 36 131 - -
Dere08g1462 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 431 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1462 Dere-ChrDere08 19310982 19314677 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1462 198 810 WRKY Transcription Factor Family AT5G45050 23.653 1.71e-09 60.5