Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1458 ATGGCTGCTGAAATGGTGGGTGAGGCGTTTCTCTCTGCTTTCCTCCATGTTTTGTTCGATAGGATAGCGTCTCCTGAGGTACTAGACTTCGTTCAAGGGAACAAGCTCGATGGTGATCTTCTGAATAAGTTGAAAGTGCAGTTGCTGTCTGTTGGCGCAGTGCTCAAGGACGCTGAAGAAAGGCAAACCACGAATTTGATCGTCAAGGAGTGGCTCAACGAGCTTAGAGATACCATGTTTGAAGCCGAGGATATTATCGATGATATCATCACTGTAACATCGTGCCACAAATTGGAACCTGAGATCCAAACCAGCACAAACAAGTCGCGAACTTTTTTCTCCTCTCCAGTTAATAGCTTCGGTAAAAGGACTGAGAAGGTTCTTGACGGACTAAAATTTCTTATCAAACAAAAAGATGCACTTGGTTTGAAGAAAGATGCTAGTGAATCACCAAACATAAAGTTTCAAACAACTTCTCTGATAGAAAGTTCAGGTGTCTTTGGGAGGCACGAAGATAAGGAGTCCATTATAGAATTTTTACTAGACGATCGTAGTTCTGAGGATCATGGGGTATCTGTCATACCAATAGTTGGTATGGGTGGAATTGGGAAAACCACTCTTGCTCAACTTGTGTATAACGACCCTAGGGTTAAGGAGCACTTTGGTGTGAAAGCATGGGTTTGGGTTTCTCAGGAGTTTGATGTCTTTAAGGTGACAAACACTATCATACAGGCACTTGCTTTGACACGTGATGCTTTGGATCTTAATCAAAGCCAAATTAAACTCGAGGAGTTTCTTAACGAGAAGAAATTTCTGATTGTCTTTGATGACATATGGAATGAAGATTACATGGATTGGGAGCTTCTGAGGCGCCCTTTTGAGCATGGGGCTCCGGGTAGTAAGATCATTGTAACAACTCGTAGTAAGCAAGTCGCATCCATCATGCGCACTGTTCCTAATTATTATCTAAAGGAGCTATCTGATGATGATTGCTGGTTGTTGTTTGCTAAGCATGCATTTGCAGATGGAAACTTCAGAGCACATCAGAGCTTAGAGGCTATTGGCAGAGAAATAGTGAAAAAGTGCAAAGGGCTGCCATTAGCTGCAAAAGCTCTCGCAGGGCTTCTGCGCTGCAAATTAGATCAAAGGGAATGGGTTAAGGTACTAAAAAGCAATATATGGGATTTGCCACTTGGTAAGAGCAGCATTCTTCCTGCTCTTAGGTTAAGTTATCACCATCTCCCTCCACCGCTGAAGCGTTGTTTTGCTTACTGTTCCATCTTTCCGAAAAGTTTTCAATTTTGA 1305 0.4253 MAAEMVGEAFLSAFLHVLFDRIASPEVLDFVQGNKLDGDLLNKLKVQLLSVGAVLKDAEERQTTNLIVKEWLNELRDTMFEAEDIIDDIITVTSCHKLEPEIQTSTNKSRTFFSSPVNSFGKRTEKVLDGLKFLIKQKDALGLKKDASESPNIKFQTTSLIESSGVFGRHEDKESIIEFLLDDRSSEDHGVSVIPIVGMGGIGKTTLAQLVYNDPRVKEHFGVKAWVWVSQEFDVFKVTNTIIQALALTRDALDLNQSQIKLEEFLNEKKFLIVFDDIWNEDYMDWELLRRPFEHGAPGSKIIVTTRSKQVASIMRTVPNYYLKELSDDDCWLLFAKHAFADGNFRAHQSLEAIGREIVKKCKGLPLAAKALAGLLRCKLDQREWVKVLKSNIWDLPLGKSSILPALRLSYHHLPPPLKRCFAYCSIFPKSFQF 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1458 434 Pfam Rx N-terminal domain 10 105 IPR041118 -
Dere08g1458 434 Gene3D - 325 414 IPR042197 -
Dere08g1458 434 Gene3D - 34 127 - -
Dere08g1458 434 Pfam NB-ARC domain 171 390 IPR002182 GO:0043531
Dere08g1458 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 425 IPR027417 -
Dere08g1458 434 PRINTS Disease resistance protein signature 193 208 - -
Dere08g1458 434 PRINTS Disease resistance protein signature 265 279 - -
Dere08g1458 434 PRINTS Disease resistance protein signature 362 376 - -
Dere08g1458 434 PANTHER DISEASE RESISTANCE PROTEIN RP 41 434 IPR044974 GO:0006952
Dere08g1458 434 Gene3D - 147 319 IPR027417 -
Dere08g1458 434 FunFam Probable disease resistance protein At1g61300 149 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1458 Dere-ChrDere08 19287918 19289222 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1458 191 368 WRKY Transcription Factor Family AT5G45050 28.333 1.99e-08 54.7