Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1441 ATGTCAATTTTCCCAAGAAACAAACACACAATGTGCAGAGAAAGCCGGTGGGTCCTAGTCCTCCTTCTCTTGTCACTCTTTCTGGGTGAAATCCATGGAAGCAGAAGGCAAGAACAAGCTCTCAGGAATCTGAACAAGTCCAAGTTCAGAGGAGGCTTCATTGATAGAAGCAGCAAAATCATCTTCGAGGAAGACGATGAGGTTGCGTTTGGTGATGATAAAACTCATAATTATTATCCTCAAGAGGGACTGAAAGAGAAAGATAGGATAGAAAAGCTTCCAGGGCAGCCTGCGGGCGTGAAGTTCTCTCAGTATGGAGGGTATGTCACTTTGGATAAAGTTGCAGGACGTGCTTATTACTATTACTTTGTTGAAGCTCAACAGTCTAACAAGGACACATTGCCTCTTCTTCTTTGGCTCAATGGAGGCCCTGGATGTTCATCACTTGCGTATGGAGCAATGCAAGAGTTGGGACCCTTCCGAGTAAACAGTGATGGCAAAACACTTCACACAAATAGATACTCTTGGAACAATGCTGCAAATGTGTTGTTTCTGGAGTCACCGGCTGGGGTGGGATTTTCATACTCAAACAGATCATCAGATTATGACAAAAGCGGCGACAGAAGAACCGCCGCAGATAACTACGTGTTCTTGGTGAACTGGTTAAACAGATTCCCTGAATATAAAATGAGAGAATTCTACATTGCAGGAGAGAGCTATGCTGGTCACTATGTTCCCCAACTTGCCCACACCATTCTCCACCATAACATAAAGGCCAATAGAACAATCATCAACCTCAAAGGAATCATGATAGGGAATGCGGTGATAAACGCCGACACAGACAACAAGGGAATGTACGATTTCCTAGCGAGCCACGCCATCATATCAGACAAGGCGGCTCATGATGTGTACAGATTGTGTGATTTCTCAGAAGCCGCCTCCAATCAAAGCGGCGAGTGCAATGCAGCCACGAACGAAATAGAGAAGGATTTAGACTTCATTGACATCTACAACATCTATTCTCCATTGTGCCTCAACTCCAACCTCACTTCCCTCCCCAAGCCCCCCTCGGTTGTGACGGACCCCTGTAGTGATAATTATGTCTATGCTTATCTGAACCGTGGGGCTGTACAAGAGGCACTTCATGCCAATGTCACGAGACTCTCACATGACTGGGAGCTCTGCAGTGACGTCATCACAAATTGGAATGATAGTCCTTCCACAGTCCTTCCCCTTCTACATGAATTCCTTAACCATAGTCTCAGGGTTTGGATTTTCAGTGGGGACGTAGATGGGAGAGTGCCAGTAACTTCAACTAAGTATTCTATTGACAAGATGAATCTTCCCGTGAAAACTGTATGGCATCCTTGGTTAGTTAATGGAGAGGTTGGGGGATACACACAAGTGTACAAGGGAGGCCTGACATTTGCAACGGTGAGAGAAGCAGGGCATCAAGTGCCAAGTTACCAGCCTGCAAGAGCCCTTTCTTTGGTCAAACACTTCCTAGATGGCACTCCTCTTCCTCATACAAAATCAGCCTACTAA 1545 0.4563 MSIFPRNKHTMCRESRWVLVLLLLSLFLGEIHGSRRQEQALRNLNKSKFRGGFIDRSSKIIFEEDDEVAFGDDKTHNYYPQEGLKEKDRIEKLPGQPAGVKFSQYGGYVTLDKVAGRAYYYYFVEAQQSNKDTLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHTNRYSWNNAANVLFLESPAGVGFSYSNRSSDYDKSGDRRTAADNYVFLVNWLNRFPEYKMREFYIAGESYAGHYVPQLAHTILHHNIKANRTIINLKGIMIGNAVINADTDNKGMYDFLASHAIISDKAAHDVYRLCDFSEAASNQSGECNAATNEIEKDLDFIDIYNIYSPLCLNSNLTSLPKPPSVVTDPCSDNYVYAYLNRGAVQEALHANVTRLSHDWELCSDVITNWNDSPSTVLPLLHEFLNHSLRVWIFSGDVDGRVPVTSTKYSIDKMNLPVKTVWHPWLVNGEVGGYTQVYKGGLTFATVREAGHQVPSYQPARALSLVKHFLDGTPLPHTKSAY 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1441 514 SUPERFAMILY alpha/beta-Hydrolases 86 508 IPR029058 -
Dere08g1441 514 ProSitePatterns Serine carboxypeptidases, serine active site. 235 242 IPR018202 GO:0004185
Dere08g1441 514 Gene3D alpha/beta hydrolase 83 352 IPR029058 -
Dere08g1441 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 195 IPR001563 GO:0004185|GO:0006508
Dere08g1441 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 221 246 IPR001563 GO:0004185|GO:0006508
Dere08g1441 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 184 IPR001563 GO:0004185|GO:0006508
Dere08g1441 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 474 487 IPR001563 GO:0004185|GO:0006508
Dere08g1441 514 Gene3D - 363 400 - -
Dere08g1441 514 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 89 491 IPR001563 GO:0004185|GO:0006508
Dere08g1441 514 Gene3D - 409 504 - -
Dere08g1441 514 FunFam Carboxypeptidase 84 346 - -
Dere08g1441 514 Pfam Serine carboxypeptidase 94 504 IPR001563 GO:0004185|GO:0006508
Dere08g1441 514 FunFam Carboxypeptidase 409 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1441 Dere-ChrDere08 19091346 19101869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1441 371 507 Calmodulin-binding Proteins AT2G22960 30.657 2.96e-16 75.1