Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1439 ATGGTGTGCATAAGGAAGGCCACAGTAGATGATCTATTGGCTATGCAAGCCTGTAATTTGTTCTGTCTTCCTGAGAATTACCAAATGAAGTACTATCTCTACCACATCCTCTCGTGGCCGCAGCTTCTCTACGTCGCCGAGGATTACAACGGCCGTATCGTCGGTTACGTTCTGGCCAAAATGGAGGAAGAAACCAACGAGTGCCATGGCCACATCACCTCCCTTGCTGTCCTCCGAACCCACCGCAAGTTGGGTTTGGCTACCAAACTCATGAACGCTGCTCAGAACGCCATGGAGCAGGTGTTTGGAGCTGAGTATGTCTCGCTTCACGTGAGGAAGAGTAATCGGGCTGCCTTCAATTTGTACACCGAGACTTTGGGGTATCAGATTCACGATGTGGAGGCTAAGTATTACGCCGACGGAGAGGATGCTTATGACATGAGGAAGCAGCTGAAGGGAAAGCAACTGCATCATCATGGTGGTGGTGGTCATCATCACCACCATCACCACCATCACCACCACCATCACCACCACCACCACCACCATGGCGGTGGCTGTTGTTCCGGGGAGGCAAAGGTGGAGAAGACAGAGACGAAGGGGAATACCAAAGCAGAGTCCAAAGGGAGTGCCAAAGCGACCTGA 642 0.5202 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETNECHGHITSLAVLRTHRKLGLATKLMNAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYQIHDVEAKYYADGEDAYDMRKQLKGKQLHHHGGGGHHHHHHHHHHHHHHHHHHHGGGCCSGEAKVEKTETKGNTKAESKGSAKAT 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1439 213 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
Dere08g1439 213 MobiDBLite consensus disorder prediction 184 204 - -
Dere08g1439 213 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016747
Dere08g1439 213 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
Dere08g1439 213 CDD NAT_SF 43 110 - -
Dere08g1439 213 MobiDBLite consensus disorder prediction 152 183 - -
Dere08g1439 213 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 181 IPR045047 GO:0004596|GO:0006474|GO:0031415
Dere08g1439 213 Gene3D - 2 192 - -
Dere08g1439 213 FunFam N-alpha-acetyltransferase daf-31-like 2 186 - -
Dere08g1439 213 MobiDBLite consensus disorder prediction 152 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1439 Dere-ChrDere08 19055686 19056327 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere08g1439 Acetyltransf_1 3.9e-16 CL0257