Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1398 ATGACAAACTACTGCGATTGTGTTTTTCTCCTATTGTCTGTGAAGGCAGAAGGCAGTACGTCGCCATCTTCCTTATTTCCGAGCATCGTTTCGTTCTCTAGTGTCTCTCTTCCCAGAAACGCAAAATTTTCGAAATATTTAAGTTTCTCAGTGATGGCATTGTCTGGCCGAATCAGATCGGGCATTTCCGTCGTCAGCAAACTTAGGCATCTTGCCTCTGATTCTCTCTCTGCCCAGAGATCCGCGCTTCCCCGACTTCTCGTCGGCCCCGCAAATTCACAGGCCTCAAGAAATTATGCCACCTCAACCGGGCAAAAGGAACAGAAAGTTAAGGTCCCTCTGGCTTTGTTTGGGGGTGCAGGAAACTATGCTACTGCTTTGTATATTGCAGCTATAAAAGCTAATTCTTTGGAAAAAGTTGAGTCAGAGATTCTTGACCTTGTTGAGGCAACAAAGAGAAGCCCCAAATTTTTAGAATTTACCAAGGACTTGTCTGTGCCCAAAGATACTAGAGTAAAAGCAATCCAGGCTATATGTGGTGATGCTAAATTTTCAGAAATCACAAAGAACTTCCTTGTTGTGTTAGCTGAGAATGGGAGGCTACGAAACTTAGAAAGCATAGCAAAGAGGTTTGTGGAGTTGACTATGGCATATAAGGGAGAAGTGAAAGCCACTGTGACCACTGTCATTCCTCTTCCCCCTCAAGAGGAGAAGGAACTGAAGGAGACTCTTCAGGAGATCATAGGAGCCGGGAAAAAGGTTCATCTTGAACAGAAGATTGATCCAAGTATACTGGGTGGTGTAGTCATAGAGTTTAGCCAGAAGGTCTTGGACATGTCAATTAAGACTAGGGCACTCCAGATGGAGAGGTTCCTGCGAGACCCTGTAAACGTTGCTGACATCTAG 906 0.4481 MTNYCDCVFLLLSVKAEGSTSPSSLFPSIVSFSSVSLPRNAKFSKYLSFSVMALSGRIRSGISVVSKLRHLASDSLSAQRSALPRLLVGPANSQASRNYATSTGQKEQKVKVPLALFGGAGNYATALYIAAIKANSLEKVESEILDLVEATKRSPKFLEFTKDLSVPKDTRVKAIQAICGDAKFSEITKNFLVVLAENGRLRNLESIAKRFVELTMAYKGEVKATVTTVIPLPPQEEKELKETLQEIIGAGKKVHLEQKIDPSILGGVVIEFSQKVLDMSIKTRALQMERFLRDPVNVADI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1398 301 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 118 220 IPR026015 -
Dere08g1398 301 Gene3D - 118 212 IPR026015 -
Dere08g1398 301 PANTHER ATP SYNTHASE DELTA CHAIN 85 294 IPR000711 GO:0015986|GO:0046933
Dere08g1398 301 PRINTS ATP synthase delta subunit signature 200 214 IPR000711 GO:0015986|GO:0046933
Dere08g1398 301 PRINTS ATP synthase delta subunit signature 252 267 IPR000711 GO:0015986|GO:0046933
Dere08g1398 301 PRINTS ATP synthase delta subunit signature 267 285 IPR000711 GO:0015986|GO:0046933
Dere08g1398 301 PRINTS ATP synthase delta subunit signature 119 138 IPR000711 GO:0015986|GO:0046933
Dere08g1398 301 PRINTS ATP synthase delta subunit signature 189 200 IPR000711 GO:0015986|GO:0046933
Dere08g1398 301 Hamap ATP synthase subunit delta [atpD]. 115 294 IPR000711 GO:0015986|GO:0046933
Dere08g1398 301 Pfam ATP synthase delta (OSCP) subunit 120 290 IPR000711 GO:0015986|GO:0046933
Dere08g1398 301 NCBIfam ATP synthase F1 subunit delta 121 290 IPR000711 GO:0015986|GO:0046933
Dere08g1398 301 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 254 273 IPR020781 GO:0015986|GO:0016020|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1398 Dere-ChrDere08 18413305 18419372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1398 158 301 Primary Pumps ATPases AT5G13450 65.972 2.63e-66 204