Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1395 ATGACCTCGCCTCCTCCACACGTACCTCCTCGCTTCGCTCTTCCCTTACCATTCGCATTTCCAAACCCTGCGAAGGGTGAAGAGCGCCTCCGAGGAATTCGCGTAGCCACCCACCATCCTCTTAGGATAGTCACCATGGTTGATCAGGTTCAGCACCCCACCATCATTGAAAAGGTTGCCTGCCAGCTCCATTCGCGTTCTGGTCTTTCTCCTGATATTAGGAGTTATGACAGCAGTTTTGCTCAACCCGCTCTTTACCAAAGACGCTCATTTGGGAATTACTCAAATGCCGCAATGCAATATCCAGCAATGCCTGCATGTAGAGCCACTACTGAATTGTCTACTGTTGCTGCAACGACAGGCTCACCTATCTTCGTAGCTGCTCCCGCCGAGAAAGGCAATTTTCTAGTTGACTTTCTTATGGGTGGAGTTTCTGCTGCTGTATCAAAAACTGCTGCTGCTCCCATTGAACGTGTCAAACTTTTGATACAGAACCAAGATGAGATGATTAAAGCTGGTAGGCTCTCTGAGCCCTATAAGGGTATTGGTGATTGTTTTAAGCGAACAATCCAAGATGAAGGTATGCTTTCCCTTTGGAGAGGTAATACTGCCAATGTCATCCGTTATTTCCCCACTCAGGCCTTGAACTTTGCTTTTAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGACAAGGATGGTTACTGGAAATGGTTTGCTGGCAACTTGGCCTCGGGAGGAGCTGCTGGTGCTTCATCTCTATTCTTTGTTTACTCCCTTGACTATGCTCGTACCCGTCTGGCTAATGATGCTAAGGCTGCAAAGAAGGGTGGAGGAGGAAGGCAATTCAATGGGCTTATTGATGTCTACAAGAAGACATTGGCTTCTGATGGTATTGCCGGTCTTTACCGTGGTTTCAACATCTCATGTGTTGGAATCATTGTGTATCGTGGTCTTTACTTTGGAATGTATGATTCCCTGAAGCCAGTGCTCCTGACTGGCAAGTTACAGGATAGCTTTTTCGCTAGCTTTGCCCTGGGATGGCTCATCACCAATGGTGCAGGTCTAGCATCGTACCCAATTGACACTGTCAGAAGAAGAATGATGATGACCTCTGGTGAAGCGGTCAAGTACAAGAGCTCCATGGATGCATTTGCTCAAATTGTCAAGAATGAGGGCACTAAGTCCTTGTTCAAGGGAGCTGGTGCCAACATCCTCCGTGCCGTTGCCGGTGCCGGTGTGCTTGCCGGTTATGACAAGTTACAGGTAATAGTGTTTGGAAAGAAGTACGGATCCGGGGGGGCTTAG 1311 0.4775 MTSPPPHVPPRFALPLPFAFPNPAKGEERLRGIRVATHHPLRIVTMVDQVQHPTIIEKVACQLHSRSGLSPDIRSYDSSFAQPALYQRRSFGNYSNAAMQYPAMPACRATTELSTVAATTGSPIFVAAPAEKGNFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQDEGMLSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGGGGRQFNGLIDVYKKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFAQIVKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1395 436 ProSiteProfiles Solute carrier (Solcar) repeat profile. 339 425 IPR018108 -
Dere08g1395 436 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 128 435 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere08g1395 436 SUPERFAMILY Mitochondrial carrier 133 421 IPR023395 -
Dere08g1395 436 ProSiteProfiles Solute carrier (Solcar) repeat profile. 133 226 IPR018108 -
Dere08g1395 436 Gene3D Mitochondrial carrier domain 136 432 IPR023395 -
Dere08g1395 436 PRINTS Mitochondrial carrier protein signature 151 165 IPR002067 GO:0055085
Dere08g1395 436 PRINTS Mitochondrial carrier protein signature 304 322 IPR002067 GO:0055085
Dere08g1395 436 PRINTS Mitochondrial carrier protein signature 253 271 IPR002067 GO:0055085
Dere08g1395 436 PRINTS Mitochondrial carrier protein signature 201 221 IPR002067 GO:0055085
Dere08g1395 436 PRINTS Mitochondrial carrier protein signature 138 151 IPR002067 GO:0055085
Dere08g1395 436 PRINTS Mitochondrial carrier protein signature 348 370 IPR002067 GO:0055085
Dere08g1395 436 FunFam ADP,ATP carrier protein, mitochondrial 136 432 - -
Dere08g1395 436 ProSiteProfiles Solute carrier (Solcar) repeat profile. 238 331 IPR018108 -
Dere08g1395 436 PRINTS Adenine nucleotide translocator signature 179 200 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere08g1395 436 PRINTS Adenine nucleotide translocator signature 135 147 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere08g1395 436 PRINTS Adenine nucleotide translocator signature 344 360 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere08g1395 436 PRINTS Adenine nucleotide translocator signature 212 224 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere08g1395 436 PRINTS Adenine nucleotide translocator signature 238 251 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere08g1395 436 Pfam Mitochondrial carrier protein 340 425 IPR018108 -
Dere08g1395 436 Pfam Mitochondrial carrier protein 237 334 IPR018108 -
Dere08g1395 436 Pfam Mitochondrial carrier protein 134 230 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1395 Dere-ChrDere08 18381494 18387215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1395 46 436 Antiporters AT5G13490 82.487 0.0 625
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1395 08 18381494 18387215 Dere08g1395 08 18381494 18387215 ECH