Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1370 ATGTGGAGATTTAAGCCATTCACCCATAAAGAGCCGGCTGGGCTTGAAGGACGCTTTATAGATGTTGGCAATCTTAAAATAAATGTACACAAGGCCATTGCTGAAGGGGGGTTCTCCTGTGTCTATTTGGCTCGTGATGCTGTACACATGTCAAAACAATATGCTTTGAAGCATATTATATGCAATGATGAAGAATCCCTTGGATTGGTAAAAAAGGAGATCTCAGTGATGAAGTCACTGAAAGGGCATCCCAACATTGTCACACTTTATGCACATACAATCATTGATATGGGCAGGACAAAAGAGGCGCTCCTTGTGATGGAATTCTGTGAAAAGTCTCTGGTGCATGTGCTGGAGAGCCGAGGAGCTGGGTATTTTGATGAGCGACAGGTTTTGTTGATCTTCAGGGATGTTTGTAATGCAGTTTTTGCTATGCACAGCCAATCCCCACCTATTGCTCACCGAGACTTGAAAGCTGAAAATGTTCTATTAGCTTCAGATGGCTTATGGAAGTTGTGCGACTTTGGAAGCACATCCACCAATCACAAGCGTTTTGAGAAACCAGAAGAAATGGGGATTGAGGAAGATAATATCAGAAAGTACACAACTCCTGCCTACAGGGCCCCTGAGATGTGGGATCTATTTCTGAGAGAAGTCATTAATGAAAAAGTGGATATGTGGGCTCTGGGGTGTCTCCTCTTTCGCATATGCTACTTCAAAAGTGCATTTGATGGCGAATCAAAGCTTCAAGTCTTAAATGGAAACTATCGCATCCCTGATTTGCCTAAATACAGCTTATCAATTGTAGACCTAATCAGAGACATGCTTCAAGCTAGACCTGATGACAGACCAGATATCTCGCAGGTCTGGTTTCGTGTTAATGAGCACTTACCTGTTAATTTGCAGAAGTCTTTACCTGACACACCACCTGAATTGCCTTTTCCCCACAATCATGAAGGTGCTGCAAAGCCTGCAAATAGATCAGCTCCAATGCCTCGCAGGAGTCCTCCCCCACAATCTGGAGAACCTAAAACTACATTACAGCCATCCCTTTCTTCTAGGGGGGGTGGGGCTGCGGGCCAGCTTGGTGCTTTCTGGTCCACTCAGCATGCAAAAAATTCACTTGCAACAGAGGAAAAGGGCAAACCCATATTTGATGAGGAACCAGCTGGTCATCATATTTCATCAAAACTTGATAAACTTCATCCAGGAAATAATCAGTTACCCAACAATGTTAGCTCTAACAAAGTAATTAATGCCCAATCTCAAACTCTGAAAAGCAGTTCACATGGAAAATCAAACAAGCCTGATACTGGCTCTTCCAAGGACTTTGAAATAAAATTTTTCCAGGGTCAAGATCATAGTAGTGAGAAGCGAATGTCGTCAAGTATGGAGAACACAGCTGCTTTTCAGGACCAGGCTTTCAACACTTTTGTTGCCGAATTTGATACTAATAAATTCAACTCTGGATCTAGCTGTAAATCTGATAGGGTAGGAGCATTAGAGGCTGAGGTGGAGAAGCTCAAGGAGCAACTTAAGGAAGTTAACTGGGAAAAAGCTAAAGTAACTTCCAAGTATGAAAAGCTCACAGCGATCTGCCGATCTCAAAGGCATGAGCTCCAGGATCTCAAGCAAGCACTTGCAGTAAAAAATTCATCGCCAAATAGGGAGGGTTTGAGAACGCCTCCAGTTGCAACACCTGCTGCGATGAGACAGAACATGGGTGGGATAGTCCAGGAACTCGCACAAAATAAAACTGAATGGAAAACTCCTAGTTCAGAACCTAAGCCATGGCAAGCTTTTCCAGAGGAACCCCGGCAACCAAAGTCTCTCTCGGCAGACAATACATCCAAGGCTTCTGGTAATAGGAGTGGTCAGCAAAGCAAGCAGACTGCTCAACTAAATACTGAAATTGATTCTTGGGGTTTTGGAACTGATAGCTTCTCTGCTATGCGTGCTGGAAGCCCACAGGTGCCAAGGCATGCTACTGAAGGGAGTAATTCTCAGGCTAATTCTACCTTTGAGAGCAAGTCAGCGTCTCAACCTGCTGGATGGGCTGGTTTTTAA 2067 0.4403 MWRFKPFTHKEPAGLEGRFIDVGNLKINVHKAIAEGGFSCVYLARDAVHMSKQYALKHIICNDEESLGLVKKEISVMKSLKGHPNIVTLYAHTIIDMGRTKEALLVMEFCEKSLVHVLESRGAGYFDERQVLLIFRDVCNAVFAMHSQSPPIAHRDLKAENVLLASDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDMWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSLSIVDLIRDMLQARPDDRPDISQVWFRVNEHLPVNLQKSLPDTPPELPFPHNHEGAAKPANRSAPMPRRSPPPQSGEPKTTLQPSLSSRGGGAAGQLGAFWSTQHAKNSLATEEKGKPIFDEEPAGHHISSKLDKLHPGNNQLPNNVSSNKVINAQSQTLKSSSHGKSNKPDTGSSKDFEIKFFQGQDHSSEKRMSSSMENTAAFQDQAFNTFVAEFDTNKFNSGSSCKSDRVGALEAEVEKLKEQLKEVNWEKAKVTSKYEKLTAICRSQRHELQDLKQALAVKNSSPNREGLRTPPVATPAAMRQNMGGIVQELAQNKTEWKTPSSEPKPWQAFPEEPRQPKSLSADNTSKASGNRSGQQSKQTAQLNTEIDSWGFGTDSFSAMRAGSPQVPRHATEGSNSQANSTFESKSASQPAGWAGF 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1370 688 MobiDBLite consensus disorder prediction 385 442 - -
Dere08g1370 688 Gene3D Transferase(Phosphotransferase) domain 1 11 306 - -
Dere08g1370 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Dere08g1370 688 MobiDBLite consensus disorder prediction 385 399 - -
Dere08g1370 688 SMART serkin_6 27 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1370 688 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Dere08g1370 688 MobiDBLite consensus disorder prediction 301 361 - -
Dere08g1370 688 MobiDBLite consensus disorder prediction 400 435 - -
Dere08g1370 688 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1370 688 MobiDBLite consensus disorder prediction 660 680 - -
Dere08g1370 688 Coils Coil 498 546 - -
Dere08g1370 688 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1370 688 CDD STKc_GAK_like 26 298 - -
Dere08g1370 688 SUPERFAMILY Protein kinase-like (PK-like) 28 337 IPR011009 -
Dere08g1370 688 MobiDBLite consensus disorder prediction 609 643 - -
Dere08g1370 688 PANTHER SERINE/THREONINE PROTEIN KINASE 1 671 - -
Dere08g1370 688 MobiDBLite consensus disorder prediction 586 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1370 Dere-ChrDere08 17952188 17955402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1370 26 292 Miscellaneous Gene Families AT2G34180 29.181 8.99e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Dere08g1370 Pkinase 1.4e-40 CL0016