Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1369 ATGGATAGAAACTATTCTAAGGGCAGGTTCCAGCTTCGCTTCCGAGATGATGGAGATGTTGTTCTTGAACCAATTGCCCCATCTACAGATTTTGCCTATAAATCTTATTTCAGCACCCAAACAGCCAACTCTGATGATATGGATGCTGGGTATAGACTGGTTCTTAATGAGTCAGGTCATTTGAATGTTGTCAGAAGGAATGGCAACACTGTCAATATTGCAAACAGAACAGTAGTTCCTTCGGGGAAATTCTATTACAGGGCAACACTTGATTTTGATGGGATTTTCTCACAGTATGCTCACCCCAAGGATAGTGGGAGCTGGAGTTCTTGGATCACTGTTCGGTCTGTCCCTGATAACATTTGCTGGGATATGAATGGAGACTTGGGAGGAGGACCTTGTGGTTACAACAGCTTCTGTAGACTTGATGCTCGTAAAAGGCCAATTTGTGATTGTCTTCCTGGGTTTTCCCCTTTAGATCCCAATAACAAGTACAATGGCTGCAAGCTAGTTAAACTAGTGAATTGTGAATCAGTGAAGAAGCTGGAAAAGCTGCACCAAGAGGGAGAAAAGGAGTTCAAGACAGAAGTAAGCACTATAGCAAAAACCCATCACAAGAACCTAGTTAGACTTCTGGGGTTCTGTGACGAAGGGCCAAACAAGCTCTTGGTGTATGAGTTCATGAGCAATGGTACACTAGCAAGCTTCCTCTTTGGGATCTCGAGGCCTGATTGGAACAAAAGAATTCAAATAGCATCTGGGATTGCAAGAGGGATCACGTATTTACATGAAGAATGTGTCATACAGATCATCCACTGTGACATCAAGCCTCAAAACATCCTCCTGGATGATTCATTCACGGCAAAAATATCGGATTTTGGGTTGGCGAAGCTTCTTCTGAGTGATCAAACTCGAACCCATACAGTAATTAGAGGGACAAGAGGGTACGTGGCACCAGAATGGTTCAGGAACACTCCTATTACCCCGAAAATCGATGTTTACAGTTATGGGGTGATGTTGCTGGAGATTATATTCTGCAGGAAAGGCATTGACCTGGGAAAAGAGAATGAAGAGGAAGTGTTGCTGATTGACTGGGTTTATGACTGCTATAAGGACAGAAAATTATACAACCTTGTAGAGGATGATGAGGAGGCTAGAAATGACATGAAGAGGTTGGAAAGGCTAGTGATGGTCGCTCTTTGGTGCATACAAGAGGACCCATCTTCGAGACCTTCCATGAAGAAGGTCACCCAGATGCTTGAAGGCGTTGTTGATGTGTCTGTGCCACCATGTCCTTCCCCTTTTAGTTCTCTCTGTTAA 1320 0.4371 MDRNYSKGRFQLRFRDDGDVVLEPIAPSTDFAYKSYFSTQTANSDDMDAGYRLVLNESGHLNVVRRNGNTVNIANRTVVPSGKFYYRATLDFDGIFSQYAHPKDSGSWSSWITVRSVPDNICWDMNGDLGGGPCGYNSFCRLDARKRPICDCLPGFSPLDPNNKYNGCKLVKLVNCESVKKLEKLHQEGEKEFKTEVSTIAKTHHKNLVRLLGFCDEGPNKLLVYEFMSNGTLASFLFGISRPDWNKRIQIASGIARGITYLHEECVIQIIHCDIKPQNILLDDSFTAKISDFGLAKLLLSDQTRTHTVIRGTRGYVAPEWFRNTPITPKIDVYSYGVMLLEIIFCRKGIDLGKENEEEVLLIDWVYDCYKDRKLYNLVEDDEEARNDMKRLERLVMVALWCIQEDPSSRPSMKKVTQMLEGVVDVSVPPCPSPFSSLC 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1369 439 SUPERFAMILY Protein kinase-like (PK-like) 179 431 IPR011009 -
Dere08g1369 439 ProSiteProfiles Protein kinase domain profile. 123 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1369 439 FunFam Serine/threonine-protein kinase 1 125 - -
Dere08g1369 439 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 228 428 - -
Dere08g1369 439 SMART serkin_6 123 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1369 439 Pfam Protein kinase domain 179 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1369 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Dere08g1369 439 Gene3D - 1 116 IPR036426 -
Dere08g1369 439 Gene3D Phosphorylase Kinase; domain 1 166 228 - -
Dere08g1369 439 Gene3D Transferase(Phosphotransferase) domain 1 229 429 - -
Dere08g1369 439 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1369 Dere-ChrDere08 17927608 17929506 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1369 189 422 Receptor kinase-like Gene Family AT1G60800 44.118 4.06e-64 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere08g1369 Pkinase 6.1e-44 CL0016