Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1335 ATGAGAAGCGTGCACGACGCACAAACCGGAGTGCTACTCTCTCTCTCTCTCTGCGCCTCTAGTCTCTGGTGCCTACTGGTGTCCGTACCTGCCCGGTGGTGTACCAGTCCATCAAGGGCTCCCCCTCGGCGATCTGAGTTTGTGATCTTTGAGGTTTTACACTTATATGCCCTATGCTTGGCCCTTGTGCTGGATTGGAGGATGATGGCTGACCAATCTGGCCAAGGATTTGATTCAGATGAAAGTGACTTTGATATGCAAGCAGAAATCAGTGAAAAACATGCAAAAGTAGACGATCTCTCTCAAAACTTAGATTTCTGTGCAGGTGAAGATGAACAATCTGTTGCAGATATTTTTGAAAATGCTGAAACTTCAGAACCATTTGTAGGCATGGAGTTCAATTCAAGAGATGAAGCCAGAGAATTTTACATCGCCTATGGTAGGCGGATGGGTTTTACTGTACGTATACACCACAACCGCCGTTCGAGGGTAAATAATCAGGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTTTCGTGCAAAAAAGTATGTATATAGAAAAGATAGAGTGCTTCCTCCTCCCCCAGTCACCAGAGAAGGTTGTCAGGCTATGATAAGGCTGGCTCTTCGGGATGGAGGGAGGTGGGTTGTTACCAAATTCGTGAAGGAGCATACTCATATACTGATGAGTCCTAGTAAAGTTCCATGGAGAGGATCTGGAAAGCACTTGGTCAGTGAGGATGAGAAAGATAAGAGAATTCGTGAACTATCCCTTGAATTGTACAATGAAAGGCAAAAGTGCAAGCGACGTTGTGCTGCATATGAAGAACAACTAAATATGATCCTGAATGATTTGGAAAAGCACACTGAACACATCTCCAAAAAGGTTGCTGATATAGTCCAAAGTATAAGAGAGATTGAAGAGGAGAAATCAGATTCAGACGGTGGGTAG 957 0.441 MRSVHDAQTGVLLSLSLCASSLWCLLVSVPARWCTSPSRAPPRRSEFVIFEVLHLYALCLALVLDWRMMADQSGQGFDSDESDFDMQAEISEKHAKVDDLSQNLDFCAGEDEQSVADIFENAETSEPFVGMEFNSRDEAREFYIAYGRRMGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVYRKDRVLPPPPVTREGCQAMIRLALRDGGRWVVTKFVKEHTHILMSPSKVPWRGSGKHLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNMILNDLEKHTEHISKKVADIVQSIREIEEEKSDSDGG 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1335 318 Coils Coil 266 293 - -
Dere08g1335 318 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 81 311 - -
Dere08g1335 318 Pfam FAR1 DNA-binding domain 141 231 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1335 Dere-ChrDere08 17485471 17489079 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere08g1335 FAR1 1e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1335 08 17485471 17489079 Dere08g1335 08 17485471 17489079 ECH