Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1329 ATGGATAAGGGCAAATCCCCTGGTCATGGTGGAGGTCTCCCACCTTCGGGCCGTTATTCTGGTTTTTCGCCTGCTGAAGGCACCTTCAATGTGAAATCAGAGCCATTGTCAGCATCATTATCGTATCCTCCACTGGCACCGGGTACAGACTCAGACGCGGGTCAGTTTGGGCATGGAATTACCATGGATTCTAGTAACTTTAGTCATGATATTAGCAGAATGCCTGATAATCCCCCAAGAAATAGAGGTCATAGACGTGCCCATTCTGAGATTCTCACCCTACCTGACGATATTAGCTTTGACAGTGACCTTGGTGTAGTTGGAGGTGTTGACGGACCCTCATTTTCCGATGAAACTGAGGAAGACTTACTGTCCATGTACCTTAATATGGACAAATTCAATTCATCATCTGCTACATCTGCATTTCAAGTGTGGGAATCGTCTTCTGCTGCTGCGGCATCAGATTCAGCGCCAACCTCAACTCCAGCATCAGGAGCAGCCGCCTCTTCTGCAGAGAACATTGCTATTGGTGTTAATGATTGGCCCAGAGCTAGGCACCAACATAGCCAGTCCATGGATGGGTCAACAACCATTAAACCGGAAATGCTAGTTTCAGGTTCAGAAGATATCTCTGCAGCTGATTCCAAGAAAGCAATGTCTGCTGCCAAACTTGCAGAACTTGCTTTACTTGACCCCAAGCGTGCAAAAAGGATTTGGGCTAATAGGCAGTCTGCTGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAGCTTGAAAGGAAGGTGCAGACATTGCAAACAGAAGCAACATCTTTGTCTGCACAGTTAACTCTCTTGCAGAGAGATACAAATGGATTGACTGCTGAGAACAGTGAGCTGAAGTTAAGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAAGACGCCTTAAATGATGCGTTGAAAGAGGAAATTCAGCATTTGAAAGTATTGACTGGGCAAGCTATGCCAAATGGAGGACCTATGATGAACTTTACTTCTTTTGGAGGAAGCCAACAATTCTATCCCAACAATCATGCCATGCGTACTCTTTTAGCTGCACAGCAGTTTCAACAGCTCCAAATTCATCCTCAAAAGCAGCAGCAGCAGTTTCAGCAGCATCAACTGCATCAGCTTCAGCAGCAACAAATGCAGCAGCAGGAACAGCAGCATCAACCAATGGGGGACCTGAAAATGAGAGGATCTACACCTTCTCCGAGTCCTAAAGATAATGCTTCATCAGATATAAGTCCTTCGGCAGCTATGGATTGTTGA 1296 0.4591 MDKGKSPGHGGGLPPSGRYSGFSPAEGTFNVKSEPLSASLSYPPLAPGTDSDAGQFGHGITMDSSNFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGVDGPSFSDETEEDLLSMYLNMDKFNSSSATSAFQVWESSSAAAASDSAPTSTPASGAAASSAENIAIGVNDWPRARHQHSQSMDGSTTIKPEMLVSGSEDISAADSKKAMSAAKLAELALLDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQAMPNGGPMMNFTSFGGSQQFYPNNHAMRTLLAAQQFQQLQIHPQKQQQQFQQHQLHQLQQQQMQQQEQQHQPMGDLKMRGSTPSPSPKDNASSDISPSAAMDC 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1329 431 MobiDBLite consensus disorder prediction 372 431 - -
Dere08g1329 431 Pfam bZIP transcription factor 233 287 IPR004827 GO:0003700|GO:0006355
Dere08g1329 431 MobiDBLite consensus disorder prediction 411 425 - -
Dere08g1329 431 MobiDBLite consensus disorder prediction 1 86 - -
Dere08g1329 431 SUPERFAMILY Leucine zipper domain 233 284 IPR046347 GO:0003700|GO:0006355
Dere08g1329 431 SMART brlzneu 229 293 IPR004827 GO:0003700|GO:0006355
Dere08g1329 431 MobiDBLite consensus disorder prediction 58 72 - -
Dere08g1329 431 MobiDBLite consensus disorder prediction 372 400 - -
Dere08g1329 431 MobiDBLite consensus disorder prediction 152 171 - -
Dere08g1329 431 FunFam probable transcription factor PosF21 232 285 - -
Dere08g1329 431 Gene3D - 232 285 - -
Dere08g1329 431 MobiDBLite consensus disorder prediction 152 168 - -
Dere08g1329 431 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 40 398 - -
Dere08g1329 431 Coils Coil 249 318 - -
Dere08g1329 431 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 231 294 IPR004827 GO:0003700|GO:0006355
Dere08g1329 431 CDD bZIP_plant_RF2 234 283 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1329 Dere-ChrDere08 17462495 17467801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1329 18 361 bZIP Transcription Factor Family AT1G06070 69.855 2.67e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere08g1329 bZIP_1 1.1e-08 CL0018