Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1320 ATGGCTAACCCATCCGGGAACCATCAGGAGCAGACCCATGTTTCGTCTTCGTTCAACGGGGTTAGTGGTGCCAATCCCAACAACGGCAATTCGGCTCCGGAGAGTTCTGGTGCGGGTCTGGCCATGAAACATAACCCTGGCATATCCTTGGATTGGACGCCAGATGAGCAGACCATACTTGAAGAGGGACTCGCAAAGTTTACTTCAGAATCTAACATAATACGCTATGCGAAGATTGCCCTACAGCTACAGAATAAGACAGTCCGGGATGTAGCACTGCGTGTCAGATGGATGAATAAAAAGGAAAATAGCAAGAGACGAAAGGATGATTTGACAAGGAAAAATAAAGATAAAAAGGAAAAAGTTTCGGATCCATCAGCAAAGTCATCTCACTTTGCCACCCGGCCCAATATTTCCCCATATGCTCCACCGATGATGATGATGGACAATGATGATGGCATTTCTTACAAAGCTATTGGAGGTCCTACAGGTGAGCTATTGGAGCAAAATGTGCAGGCCTTGAATCAAATATCTGCAAATCTGGCTGCTTTCCAGGTACAGGAGAACATCAATCTATTCTGCCAAACGAGAGATAACATTCTTAAAATTATGAATGATTTGAATGACCTGCCAGAGGTGATGAAGCAAATGCCACCTCTGCCTATAAAGGTAAATGAAGAGTTAGCCAACTCCATACTTCCAAGAACAAACCTCCCAACGCAATCATGA 729 0.4444 MANPSGNHQEQTHVSSSFNGVSGANPNNGNSAPESSGAGLAMKHNPGISLDWTPDEQTILEEGLAKFTSESNIIRYAKIALQLQNKTVRDVALRVRWMNKKENSKRRKDDLTRKNKDKKEKVSDPSAKSSHFATRPNISPYAPPMMMMDNDDGISYKAIGGPTGELLEQNVQALNQISANLAAFQVQENINLFCQTRDNILKIMNDLNDLPEVMKQMPPLPIKVNEELANSILPRTNLPTQS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1320 242 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 9 239 - -
Dere08g1320 242 MobiDBLite consensus disorder prediction 102 126 - -
Dere08g1320 242 Coils Coil 94 121 - -
Dere08g1320 242 MobiDBLite consensus disorder prediction 1 49 - -
Dere08g1320 242 Pfam Protein of unknown function (DUF3755) 183 216 IPR022228 -
Dere08g1320 242 CDD SANT 52 101 IPR001005 -
Dere08g1320 242 SUPERFAMILY Homeodomain-like 51 101 IPR009057 -
Dere08g1320 242 MobiDBLite consensus disorder prediction 102 143 - -
Dere08g1320 242 MobiDBLite consensus disorder prediction 1 35 - -
Dere08g1320 242 Gene3D - 52 128 - -
Dere08g1320 242 SMART sant 48 101 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1320 Dere-ChrDere08 17342018 17349238 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere08g1320 DUF3755 6e-19 No_clan