Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1283 ATGAATGCTCCCAGCAGAGATTTTCTAGGTGTGAGCAAGACTGAAAATCAGTCAGATCTTGCAGCTTTTGCTGAAATTAATCAGTCAAATGATACAGAATATCTATTCACTAGCAACAGTATAGTGCCGACGCAGACGGCAGTTGTAGCCACATCTAGCAACTACGAGCGTCAAGAAGATGGTAGCAGTAATTTACAGTCATTGACATTATCCATGGGTAGTGGTAAGGGTTCGACTTGCGAAGCCAGTGGTAGTGGTGACACTAGTACGAATACTGCTGAAGCTGCTCCTAGAAGAACTTCCGATACATTTGGCCAGAGAACATCCATATATCGTGGTGTAACAAGGCATAGATGGACTGGAAGGTATGAAGCTCATCTTTGGGATAATAGCTGTAGGAGGGAAGGCCAATCAAGAAAGGGTCGCCAAGGTGGGTATGACAAAGAAGAGAAAGCAGCCAAGGCCTATGATTTAGCTGCACTAAAATACTGGGGAACATCAACCACTACAAACTTTCCAATAATTAACTATGAGAAGGAATTGGAAGAAATGAAGAACATGACAAGACAAGAATTCGTGGCCGCCATACGGAGGAAGAGTAGTGGATTCTCTAGGGGTGCATCAATGTATCGGGGAGTCACCAGGCATCACCAACATGGGAGGTGGCAAGCAAGGATTGGAAGAGTGGCAGGAAACAAAGATCTTTACTTGGGGACTTTCAGTACTGAGGAAGAAGCTGCCGAAGCATATGACATAGCGGCGATAAAGTTCAGAGGTCTCAACGCTGTCACCAACTTTGACATGAATCGTTACGACGTGAAGGCCATTCTTGAAAGCAACTCTCTCCCCATCGGTGGAGGCGCAGCAAAACGATTAAAGGAGGCTCAAGCTCTAGAATCTTCCAGAAAACGCGAAGAAATGCTAGCATTTGAATATGGAAGCTCCAGTTACTCCCTTATGCACCCCCACTTCGATCAAACCCAACCTTTACTGAATCTACAAAGCCACGACATTTCTCAATACTCCTGCCCTAGTTCGTTTCATCATGGCTTTATCCAAACCTTACAGAATAGTTCTAGTTACAATATTCATCAATCGCCTCAGGTTCAGAATAATGCTCATGCTCCATTTTTCAACGCCCACCTTCACAACCTCAACCACCCTGGTTTGATTCCGGGACTCATCAGCACGGGCTCATCTTCCTCTTCGTCGTCTGCGATAGACGACAGTGGAGGGTTTATAAGGGCTGGTGGGCTTGGGATGCCTCTGAATTCGACGTCGGCGACGGAGGAACATGCGGTGCTTAAGGTTGACTATGGCGTGGCTTCTGACGCTTATGCCGGCTGGTCGGCGCCGAACTCCGTGCAGCCACCACAGGGTGGTGCTTTTACGATGTGGAATGACTGA 1407 0.4691 MNAPSRDFLGVSKTENQSDLAAFAEINQSNDTEYLFTSNSIVPTQTAVVATSSNYERQEDGSSNLQSLTLSMGSGKGSTCEASGSGDTSTNTAEAAPRRTSDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAAKAYDLAALKYWGTSTTTNFPIINYEKELEEMKNMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKAILESNSLPIGGGAAKRLKEAQALESSRKREEMLAFEYGSSSYSLMHPHFDQTQPLLNLQSHDISQYSCPSSFHHGFIQTLQNSSSYNIHQSPQVQNNAHAPFFNAHLHNLNHPGLIPGLISTGSSSSSSSAIDDSGGFIRAGGLGMPLNSTSATEEHAVLKVDYGVASDAYAGWSAPNSVQPPQGGAFTMWND 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1283 468 Gene3D AP2/ERF domain 110 175 IPR036955 GO:0003700|GO:0006355
Dere08g1283 468 Gene3D AP2/ERF domain 209 269 IPR036955 GO:0003700|GO:0006355
Dere08g1283 468 ProSiteProfiles AP2/ERF domain profile. 110 173 IPR001471 GO:0003700|GO:0006355
Dere08g1283 468 CDD AP2 109 174 IPR001471 GO:0003700|GO:0006355
Dere08g1283 468 SMART rav1_2 110 179 IPR001471 GO:0003700|GO:0006355
Dere08g1283 468 SMART rav1_2 209 273 IPR001471 GO:0003700|GO:0006355
Dere08g1283 468 FunFam AP2-like ethylene-responsive transcription factor 208 269 - -
Dere08g1283 468 ProSiteProfiles AP2/ERF domain profile. 209 267 IPR001471 GO:0003700|GO:0006355
Dere08g1283 468 SUPERFAMILY DNA-binding domain 208 268 IPR016177 GO:0003677
Dere08g1283 468 Pfam AP2 domain 110 165 IPR001471 GO:0003700|GO:0006355
Dere08g1283 468 Pfam AP2 domain 210 259 IPR001471 GO:0003700|GO:0006355
Dere08g1283 468 SUPERFAMILY DNA-binding domain 109 174 IPR016177 GO:0003677
Dere08g1283 468 FunFam AP2-like ethylene-responsive transcription factor ANT 109 175 - -
Dere08g1283 468 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Dere08g1283 468 PRINTS Ethylene responsive element binding protein signature 249 269 IPR001471 GO:0003700|GO:0006355
Dere08g1283 468 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 61 349 - -
Dere08g1283 468 MobiDBLite consensus disorder prediction 53 107 - -
Dere08g1283 468 CDD AP2 208 267 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1283 Dere-ChrDere08 16848772 16850969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1283 7 468 AP2-EREBP Transcription Factor Family AT1G51190 57.225 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Dere08g1283 AP2 3.1e-09 CL0081