Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1266 ATGTATACATATAAACTCAGTACTAGAAGTGGAGGTGCATCGGATTTCTACGCTATGGAGTCATTGGAAAGTCTGGATAGAGAGCTAAGTGATATGAGGGAGTATTTTGAGAGTGGGAAAACGAAGGAAGCATCATGGAGGGAATCACAGCTTAAAAGGTTGCGTAGTGCACTCATGGAAAAAGAGGCGGACATCTTGAAGGTTCTCAAGCAAGATTTAGGAAAACATCACGTTGAAGCTTTCAGAGATGAGGTAGGAATCTTAACCAGGTCCATAGAGGTCGCATTGAAATCTTTAAAAAAGTGGATGGCAGGAAAAGAGGCTAAACTTCCAAAAATAGCACTGCTTTCCAGTGCAGAACTTGTTCCTGAGCCTCTTGGTCTCGTCCTCATAATCTCGTCTTGGAATTTTCCCTTCGTTGTTTTGTTTGAACAAATGGAAGGACTATCCTTGGAGCCATTAATAGGAGCAATAGCTGCTGGAAACACTGTAGTCCTAAAGCCTTCAGAGATATCCCCTGCTTGTTCTTCTCTTCTAGCTACTATCCTTCCAGCTTACTTGGACAACGAAGCCATTAGAGTATACCAAGGTGGAGCACTAGCGGGCGAACAACTCCTCCAACAAAAATGGGACAAGATCTTTTTCACAGGAAGTGCACAGGTGGGACGGATTGTTATGTCTGCAGCTGTGAAACATCTGACACCTGTCACTATGGAGTTGGGTGGAAAATGCCCTGCTGTTGTCGATTCCCTTTCGTCTTCTTGGGACAGAGAGGCGGCCGCGAGACGAATTATTGTGGCAAAATATGGGGCCTGTGGAGGTCAAGCATGCATAGCTGTCGATTATATCCTTGTAGAGAAGAATTTCTCTTCGGTTTTGGTGGAATCAATGAAGGCCTGGATTAAGAAAATGTTTGGAGAAAACCCAAAAGAATCGAACTCTATGGCGAGGATAGTTAATAGGCAACATTTCTTGAGACTGAAGAATCTTCTGAATGATCCAGAGGCCAAAGATTCGGTGGTTTTTGGTGGCTCAATGGACGAAGATAGCTTATTTATTGAACCAACAATATTGGTGGATCCACCACTTGACTCAGCAATCATGACAGAAGAAATCTTTGGTCCTCTGCTTCCAATTATTACTATAGAGAAGATTGAAGATAGTATTCAATTCATAAAGTCAAGGCCTAAACCTCTTGCCGTCTATGCCTTCACCATAAACAAGACTCTACAGAGAAGAATGTTGTCTGAAACATCATCTGGAAGTGTTGTTTTCAACGATGCAATAATTCAATATATAGTAGACACTCTTCCTTTCGGAGGCATTGGTGGAAGTGGATCTGGCAAGTATCACGGCAAATTCTCATTTGACACGTTCAGTCATGAGAAGGCTGTAGTGAGAAGAAGCTTCTACTCTGATTTCTGGTTCAGATATCCTCCATGGACTCTTCAGAAGTTTCAACTTCTTGAAGTGGCTTACAATTTAGACTATCTTGGAATACTCCTTGTCTTGTTAGGCTTCAAGAGAACAAAGCGCTCCTCAATTTGGTCTGCCATGTGA 1560 0.425 MYTYKLSTRSGGASDFYAMESLESLDRELSDMREYFESGKTKEASWRESQLKRLRSALMEKEADILKVLKQDLGKHHVEAFRDEVGILTRSIEVALKSLKKWMAGKEAKLPKIALLSSAELVPEPLGLVLIISSWNFPFVVLFEQMEGLSLEPLIGAIAAGNTVVLKPSEISPACSSLLATILPAYLDNEAIRVYQGGALAGEQLLQQKWDKIFFTGSAQVGRIVMSAAVKHLTPVTMELGGKCPAVVDSLSSSWDREAAARRIIVAKYGACGGQACIAVDYILVEKNFSSVLVESMKAWIKKMFGENPKESNSMARIVNRQHFLRLKNLLNDPEAKDSVVFGGSMDEDSLFIEPTILVDPPLDSAIMTEEIFGPLLPIITIEKIEDSIQFIKSRPKPLAVYAFTINKTLQRRMLSETSSGSVVFNDAIIQYIVDTLPFGGIGGSGSGKYHGKFSFDTFSHEKAVVRRSFYSDFWFRYPPWTLQKFQLLEVAYNLDYLGILLVLLGFKRTKRSSIWSAM 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1266 519 FunFam Aldehyde dehydrogenase 242 445 - -
Dere08g1266 519 Pfam Aldehyde dehydrogenase family 24 465 IPR015590 GO:0016491
Dere08g1266 519 Coils Coil 51 71 - -
Dere08g1266 519 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 242 445 IPR016163 GO:0016620
Dere08g1266 519 PIRSF ALDH 13 501 IPR012394 GO:0006081
Dere08g1266 519 FunFam Aldehyde dehydrogenase 33 245 - -
Dere08g1266 519 PANTHER ALDEHYDE DEHYDROGENASE 23 500 IPR012394 GO:0006081
Dere08g1266 519 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 33 463 IPR016162 GO:0016491
Dere08g1266 519 SUPERFAMILY ALDH-like 29 482 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1266 Dere-ChrDere08 16667728 16673267 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1266 19 509 Aldehyde Dehydrogenase Gene Family AT4G36250 52.642 0.0 556