Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1230 ATGGCAGAGATATGCTGCGGAGTGGTGAGCGAAAGCGAGACTTCGGGCACCTGTAAGCCGAGCTCGCGTGATGCCAGAAGGAGAAGAATGGAGATCAGGCGGTTCAAGGTGGTGGAAGGCGAAGAGAAGCGTCTGAAACTCCGCCTCGGTTCCCACTCCTTGTCTCGAGACTGTGAGAATGCCTTGGAGAACTGTGCCACTGATATAGAGAAAGCCCTTGTGTTTCTGACGCCCGAACACGAAAAATCGGAATCGGAGAGTCATGAGACGCACAGTATGGTTGTCCCCTCCAACCCAACGGACTCCCATGTTTTGGTCAGACATCTCCCCAGATTTGGGGTAGCATCTGTGTGTGGAAGGCGTAGAGATATGGAGGATGCTGTGGCCATCCACCCCGGGTTTTGCAGAGATCATCAAACCTCTGGTGAATTCCATTACTTCGGAGTTTACGATGGCCACGGTTGCTCTCATGTGGCAGCCAAGTGTAGGGACCGATTACATGAGTTGGTGAAAGAAGAACTGGAGAGAGAGGATCGGTCGATGGGTTGGGAGGGCGCGATGGAGCGAAGCTTCTCGCTAATGGACAAGGAGGTGATAGCTTGGAATGCTAACGTGTTAGAAGCCAATTGTAGGTGTGAGCTTCAATCGCCCGAGTGCGACGCCGTTGGATCTACGGCTGTTATTGCTATTTTGACGGCCGACAAGGTAATCGTCGCCAACTGCGGCGATTCCAGGGCCGTCCTCTGCCGCGACGGCAAACCCCTCCCTCTCTCCTCCGATCACAAGCCGGATCGTCCAGACGAGCTGAACCGGATCCAGGAAGCGGGAGGGCGGGTGATATACTGGGATGGACCGCGTGTCCTGGGAATGCTTGCAATGTCGAGAGCCATAGGTGACAATTATTTAAAGCCATACGTGAGCTGCGTGCCGGAGGTGACGGTAACGGATCGGACGGCGGAGGATGACTGTTTGATACTGGCGAGTGATGGGTTGTGGGACGTGGTGTCCAATGAGACGGCATGCGGGGTGGCGCGTATGTGTTTGCGGGGGAGAAACCACGCGCCGCCGAGAGCAGCGGCGGAGTTGGAGTGCGAAATGGAATGGGTTGCGTCGGAAATGTCTGACAAGGCGTGCTCTGACGCATCAATGTTGCTGACGAAGCTTGCTTTGGCCAGGCACTCCACTGACAACGTCAGCGTAGTGGTGGTCGATCTCAAGAGGAGGGCTTGA 1230 0.5553 MAEICCGVVSESETSGTCKPSSRDARRRRMEIRRFKVVEGEEKRLKLRLGSHSLSRDCENALENCATDIEKALVFLTPEHEKSESESHETHSMVVPSNPTDSHVLVRHLPRFGVASVCGRRRDMEDAVAIHPGFCRDHQTSGEFHYFGVYDGHGCSHVAAKCRDRLHELVKEELEREDRSMGWEGAMERSFSLMDKEVIAWNANVLEANCRCELQSPECDAVGSTAVIAILTADKVIVANCGDSRAVLCRDGKPLPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGMLAMSRAIGDNYLKPYVSCVPEVTVTDRTAEDDCLILASDGLWDVVSNETACGVARMCLRGRNHAPPRAAAELECEMEWVASEMSDKACSDASMLLTKLALARHSTDNVSVVVVDLKRRA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1230 409 PANTHER PROTEIN PHOSPHATASE 80 405 IPR015655 GO:0004722|GO:0006470
Dere08g1230 409 SMART PP2C_4 97 403 IPR001932 -
Dere08g1230 409 Pfam Protein phosphatase 2C 112 365 IPR001932 -
Dere08g1230 409 SUPERFAMILY PP2C-like 107 406 IPR036457 -
Dere08g1230 409 FunFam Protein phosphatase 2C 37 106 409 - -
Dere08g1230 409 CDD PP2Cc 111 405 IPR001932 -
Dere08g1230 409 ProSiteProfiles PPM-type phosphatase domain profile. 111 405 IPR001932 -
Dere08g1230 409 ProSitePatterns PPM-type phosphatase domain signature. 146 154 IPR000222 GO:0043169
Dere08g1230 409 Gene3D - 106 409 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1230 Dere-ChrDere08 16383591 16385196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1230 1 407 PP2C-type Phosphatase Gene Family AT2G29380 56.127 1.41e-149 426