Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1221 ATGATCTCTGAGGAAGCCCTTCTCGAAAACTTCGATGACAGAGAGAATGGTCCGATCTCGTTATTCTCAAATCAAAACTCAGTAAACGGGTTTGGTTTCGATGATAAATCCGTTGGTTCACCTTCCCTTTCTCCAACGGATGCAGATTCTGGCACCAGTTCGAATGAAGTATTTACAGGAATTAACAAATACTCCAATCCCATTCTCAGATACATAAGCGACATCCTCATGGATGAAGAAGATGACTTGGAGCGAAGGCCCTGCATGTTGCAAGATTGTTTAGCACTCCAAGCTGCTGAAAAGTCATTCTACGATGTCCTTACTCCTGGTTACCCCGCGCCACCCCATCATATCCCTGTTTGTAATTTCGATAGTGACAATCATGCACCATGTGCTAGCTTTGAGAGCAACAGCAGCTACGCTAGTTCTGATCATTCGTACGAGTCTGATTGGTCTTCTTCTATTTTATGTCATGATCCATTAACAGGGACACAAGCTGCAGGTAATTTTCAATATGGAGAAGGTGCGGTGCACACTTCAACACCCAGTGGAACAAGGGAAAAGAGGAGCCATCAGATGGATGACTCTACAAATGAAGAAGGAAGAGGAAGTAAGCTTTCAGCCACGTATTCCGAGGATTCAGAGGTATCGGAGGTGTTTGATGAGGTACTAGTTTGTCTGGGTGGAAGAATTGGTCAGTCCATAGCTCATGAACTATCATCACAAGCTGGTAAGAACTCAAAAGGATCTCCTGGAAAGGCAAGCCGTTCGAAGAAAGGGGCTAATAAAGAGACAACAGTAGATTTATGGACTCTACTAACTCAATGTGCGCAGGCTGTGTCAAACTATGACCAAAGGAATGCAAATGACCTTCTCAAGCAGATTAGGCAGCACTCTTCTCCTTTTGGGGATGGAATGCAGCGTTTAGCTCATTACTTTGCCAATGGACTGGAGACACGATTGGCTGCTGGGAAGCCATCTTATATGCCTCTTAATTCCAATGGGGTTACTGCTGCTGATATGTTAAAGGCTTACAAGCTATACATTACAGCCTCTCCTTTCCAGAGAGTCTCAAATTTCATGGCTAATGGGATGATCGCGAAGGAAGTAGAGAACGAAAGCACACTTCACATCATTGATTTTGGGATTAACTATGGTTTCCAGTGGCCTTGCCTCATCCATCATCTTGCAACCAGACCAGGAGGACCCATCAAGATTCGTATAACAGGAATCGATATTCCTCAACCTGGATTTCGCCCTGCGGAGAGGCTTGAGGAGACAGGGCGGCGTTTGGCTAATTATAGCAGAAGGTACAATGTGCCATTTGAATACAACTGTGTTGCACAGAGATGGGAAACTATACAACTTCAGGATCTCAAGATAGACACAAGTGAGATAACAGTTGTGAACTGCATGTACAGAATGAAGAAGCTACCTGATGAAACTGTAGGTGTAGACTGTTCCAGAGATGCTGTCTTGAAGATGATAAGGAAGATTAAACCAAACATCTTCATCCATGGAATTGCCAATGGCTCCTATAATGCGCCATTCTTCCTCTCTCGGTTCAAGGAGGCACTGTTCCACTTCTCGACATTGTTTGATATGTTTGAGGCTAATGTGGGACGTGAAGATACACATAGGGCGATGTTTGAGAAAGAACTAATTGGAAGGGATGCCATGAATGTGATAGCGTGTGAAGGGGCACAGAGAGTTGAAAGGCCTGAGACATACAAGCAGTGGCAGATTAGGAACCAGAGAGCTGGGTTCAGGCAAATCCGTCTGGAGCAAGAAAGGTTGAATAAATCAAGAGAATTTGTGAAGATGGAATACCATAAGGACTTTGTGGTCGATGAAGATGGCAAATGGGTTTTACTGGGATGGAAAGGCCGTATTATTCACGCGCTTTCATGTTGGAAACCAGCTTAA 1926 0.4429 MISEEALLENFDDRENGPISLFSNQNSVNGFGFDDKSVGSPSLSPTDADSGTSSNEVFTGINKYSNPILRYISDILMDEEDDLERRPCMLQDCLALQAAEKSFYDVLTPGYPAPPHHIPVCNFDSDNHAPCASFESNSSYASSDHSYESDWSSSILCHDPLTGTQAAGNFQYGEGAVHTSTPSGTREKRSHQMDDSTNEEGRGSKLSATYSEDSEVSEVFDEVLVCLGGRIGQSIAHELSSQAGKNSKGSPGKASRSKKGANKETTVDLWTLLTQCAQAVSNYDQRNANDLLKQIRQHSSPFGDGMQRLAHYFANGLETRLAAGKPSYMPLNSNGVTAADMLKAYKLYITASPFQRVSNFMANGMIAKEVENESTLHIIDFGINYGFQWPCLIHHLATRPGGPIKIRITGIDIPQPGFRPAERLEETGRRLANYSRRYNVPFEYNCVAQRWETIQLQDLKIDTSEITVVNCMYRMKKLPDETVGVDCSRDAVLKMIRKIKPNIFIHGIANGSYNAPFFLSRFKEALFHFSTLFDMFEANVGREDTHRAMFEKELIGRDAMNVIACEGAQRVERPETYKQWQIRNQRAGFRQIRLEQERLNKSREFVKMEYHKDFVVDEDGKWVLLGWKGRIIHALSCWKPA 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1221 641 MobiDBLite consensus disorder prediction 239 262 - -
Dere08g1221 641 Pfam GRAS domain family 271 639 IPR005202 -
Dere08g1221 641 ProSiteProfiles GRAS family profile. 260 639 IPR005202 -
Dere08g1221 641 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 213 631 IPR005202 -
Dere08g1221 641 MobiDBLite consensus disorder prediction 184 201 - -
Dere08g1221 641 MobiDBLite consensus disorder prediction 239 253 - -
Dere08g1221 641 MobiDBLite consensus disorder prediction 174 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1221 Dere-ChrDere08 16325402 16327327 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1221 64 640 GRAS Transcription Factor Family AT2G29060 46.458 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere08g1221 GRAS 9.7e-115 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1221 08 16325402 16327327 Dere08g1221 08 16325402 16327327 ECH