Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1220 ATGAGACAATTGCTCATCGGACTTTTCACTGAGCCTTGTTCTCCGAAGGTTCGCGGTATCCAATTGAAAGTACAAATAGTCAATCAAGCTCGATTTGCCGCTCTATCTGGATTCATGGATCCAAACTTGCCTGGAACTCATGATTTCATGAAAGACTACGAGATAGGTGATGGCAACGTCTTCTCTGTTCCAAATCAATACCCTAATCTAGGAGATGACTGGGATCCCGACGAACACTATCGGAACCTCCTTAGTTTCCGTGGTGATCCCTTATATCAACCTGATGTGGACCCACTTACTTCCGCTCCGCACACAAGCGTGGTTTCTGAAGGAGCACCGCCGAATCCTTCTTGGAGTGCGAGTCCTGTAGAAGGTGTTCCAGATGTCCCATATTCAAGCGTGACTTCGGCCCCGGATCCTTCTCTAGAAGACTCTGACTTTTCAGAAACCATCAAGTACATAGGTCAAGTTCTCATGGAAGAGAACTTGGAACAGAAGCCATGCATGTTTTATGATCCACTCAGTCTAAAACTCACTGAGAAATCATTCTATGATGTTCTTAGAGATAACTACCCTCTCTCCCCTAACCAACACCGTCTCTTTGACAATGTTGAGAGCCCAGATGGTCTTTTCTCTGGAACTAGTACTGATTCTAGTAGTAGCAATGGCAGCACCAACACCAGCACAAGCACCAACAACTCAATAGAGTTAAAGCCGACTTCACCGGAGACTCCTGTTTCTGGTAATTATGCTTTCCAGTTTACTTCGAAATCCATTTCTCAGCAGCCCTCTCGACCTCCAAAAACTTCAACTAATATCGGCGATAGACTGTTGGATTTGGATTCTTCTATAAATAAGCTCTTGGCTCAAAATATCTTTAGTGATGCAGAATCTGTCTCGCAATTCAAGAGAGGTTTAGAGGAAGCCAGCAAATTTCTTCCTACAGGAGCTCAACTTGTCTCCGGTCTGGAGAGCAACCCAGTGTCCGTAGAGTCAAAGGGAGTGGGAGAAAAGGCGGTAGTGAATATGGAGAAAGATGTTAGGCAGAGTTTGGGTGGTTCAAAGGGTAGAAAGAACCATGAGCGTTATGGTAGTGATGATGAAGAAGAAGGGAGAACCAACAAGCAGTCAGCAGTATATGTTGATGAGAGTGAATTATCGGACATGTTTGATAGAGTGTTGCTTAGTGTTGAGAATCTTCCATTATGTGCTGAGCACGAAAGCTTGCAGCGTGAATCAGTGAAAGACAAGCAGCCAAGTGAACAGGCTGTGGATTCGTCTGATGGAGGGAAGACTCGCTCTAAGAAACAAGTCAGGAAGAAGGAATCAGTGGATTTGAGGACACTTCTGGTTTTATGTGCGCAAGCTGTGTCTGCCAATGATTGCAGGACTGGTCATGAATTACTAAAGCAGATCAGGCAGCATTCTTCACCCTTTGGGGATGCATCACAGAGGGTTGCTCATTACTTTGCCAATGGCCTTGAGGCACGTTTGGTAGGTGATGGTGCTGGAACCCAGTTATTTTATACCTCTCTGAATTCTAAGAGGATTTCTGCAGCTGAAATTCTGAAAGCTTACCAAGTTTCACTCTCTGCCTCTCCTTTCAAGAAGTTTGCGCATTTCTTTGCAATTAAAATGATTTTCAAAGCAGCTGAAAAGGCAGAAACCCTTCATATTATCGATTTTGGTATCCTATATGGTTTCCAATGGCCAATGCTTATCAAGTTTCTGTCCAATAGGGATGGTGGACCTCCCAAGCTACGCATCACCGGAATAGAATTTCCCCAACCTGGCTTTCGTCCAGCAGAAAGAATAGAAGAAACTGGTCGTCGTCTAGGTAACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTACAAAGCTATAGCGTCACAAAACTGGGAAACCATCCGAATTGAAGACCTTAAGATTGAGAGGAATGAGGTACTTGCTGTGAACTGTCTGATGAGGTTTAAGAATTTACTGGACGAGACAATTGAAGTGAATAGTCCTAGGAATGCAGTTCTGAATCTAATAAGGAAGATGAAGCCGGATATTTTTGTTCATTCCATTATTAACGGATCCTACAATGCCCCTTTCTTTGTCACGCGGTTCAGGGAGGCGCTGTTCCATTTTTCTGCGATCTACGATATGTTTGATACCTTGATACCCCGTGAAAACCAATGGAGGTTGATGCTCGAGAGAGAATTTTATGGTCGGGAGGCTATGAACGTTGTTGCTTGTGAAGGTTTCGAAAGGGTAGAGAGGCCTGAGACATACAAACAATGGCAGGCAAGGGTTACAAGGGCCGGTTTCAAGCAGCTCCCACTGAATAAGGAGATTATGACCAAGTTCAGGAATAAGATGGAGGCATGGTACCACAAAGATTTTGTGTTTGATGAAGACAACAACTGGATGCTTCAGGGCTGGAAGGGACGCATTTTGTACGCTTCCACTTGTCATGGTAAATCTTCTATACCCAGTTCACTTGATCTTCAGGACTTGTGA 2505 0.4423 MRQLLIGLFTEPCSPKVRGIQLKVQIVNQARFAALSGFMDPNLPGTHDFMKDYEIGDGNVFSVPNQYPNLGDDWDPDEHYRNLLSFRGDPLYQPDVDPLTSAPHTSVVSEGAPPNPSWSASPVEGVPDVPYSSVTSAPDPSLEDSDFSETIKYIGQVLMEENLEQKPCMFYDPLSLKLTEKSFYDVLRDNYPLSPNQHRLFDNVESPDGLFSGTSTDSSSSNGSTNTSTSTNNSIELKPTSPETPVSGNYAFQFTSKSISQQPSRPPKTSTNIGDRLLDLDSSINKLLAQNIFSDAESVSQFKRGLEEASKFLPTGAQLVSGLESNPVSVESKGVGEKAVVNMEKDVRQSLGGSKGRKNHERYGSDDEEEGRTNKQSAVYVDESELSDMFDRVLLSVENLPLCAEHESLQRESVKDKQPSEQAVDSSDGGKTRSKKQVRKKESVDLRTLLVLCAQAVSANDCRTGHELLKQIRQHSSPFGDASQRVAHYFANGLEARLVGDGAGTQLFYTSLNSKRISAAEILKAYQVSLSASPFKKFAHFFAIKMIFKAAEKAETLHIIDFGILYGFQWPMLIKFLSNRDGGPPKLRITGIEFPQPGFRPAERIEETGRRLGNYCKRFNVPFEYKAIASQNWETIRIEDLKIERNEVLAVNCLMRFKNLLDETIEVNSPRNAVLNLIRKMKPDIFVHSIINGSYNAPFFVTRFREALFHFSAIYDMFDTLIPRENQWRLMLEREFYGREAMNVVACEGFERVERPETYKQWQARVTRAGFKQLPLNKEIMTKFRNKMEAWYHKDFVFDEDNNWMLQGWKGRILYASTCHGKSSIPSSLDLQDL 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1220 834 MobiDBLite consensus disorder prediction 198 249 - -
Dere08g1220 834 MobiDBLite consensus disorder prediction 340 379 - -
Dere08g1220 834 MobiDBLite consensus disorder prediction 208 249 - -
Dere08g1220 834 MobiDBLite consensus disorder prediction 408 439 - -
Dere08g1220 834 MobiDBLite consensus disorder prediction 340 376 - -
Dere08g1220 834 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 397 815 IPR005202 -
Dere08g1220 834 Pfam GRAS domain family 446 818 IPR005202 -
Dere08g1220 834 MobiDBLite consensus disorder prediction 99 116 - -
Dere08g1220 834 MobiDBLite consensus disorder prediction 94 124 - -
Dere08g1220 834 ProSiteProfiles GRAS family profile. 437 821 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1220 Dere-ChrDere08 16318192 16321276 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1220 150 818 GRAS Transcription Factor Family AT1G07530 51.799 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere08g1220 GRAS 5.4e-110 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1220 08 16318192 16321276 Dere07g0986 07 13363602 13366184 CCT
Dere07g0987 07 13374651 13376678 Dere08g1220 08 16318192 16321276 CCT