Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1204 ATGGGAAAGCACTTTCTTTCTTCCAATCAGTCCCCTGTTCATCTTCAGCACAATAATCCGGGATGCATGTGGGGCATATTTCATATTCTTGACTACCATCATTGGCATAATGTCAAAAAGGTGTTTCCTCTCAAAAAGCGTTACCGGGGAAGACATGCCAGATATGGGAGAAAAATCATTTTGTATAACCATGTTGTCGGTGAAGACCAACAATATGAGGCTGCAGAAACTGAACCCCTCCTGGTTAAGCAACAAAGTGAAAAGGTCAGTGCCACGGGCAAAAGATCCCCCAGAAGATGCAAGAAAGAATCACATACTGAAAATAGGTCGGTTATGGAAGAAAACACAGAATCCTGGATCTTCAGCTTCGATGCTGAACTACAACATTTTGAATCTTCGGAAAAATCTGTCCATTCAAGGCAGGACCAGGCTGCTAGAGAGTATGCACTTTTTGTAGAGAAAGATGGCAAGACTACAGAAGCTGTGCTTAACCAAAAGCATGGGGATTCAAGCAAGCTTAACAGAGACATTTCTAATAAACTAAATGACCGTATTGATGTTTTGGAGGTATTTAGAGTGGAAAAGGATTTGCTCTTGAAAATCTTACAAGATCTAGATATTGGTGAGAAAAGCTTCAAGCAGCCTTCCAACAACAAAGCAAGATTGACAAAATCAGGGTCCTTTCCTCTTGCCACGTCTTCACAAATGAGAAACATTGGCTCTAGTTCTCTCAACCACAAGAAGAATGAAGTTTGGGCCTTCCCAAAGCGGGAAAAATTGGTCACTGCTACTCGAGCAAAGAAGATATTTGCATCCAGTTTTGCAACATTTACATCTCATAATGCTAAGCAAATGCCTTTAGTTACTGATCACGACGTGGATAGAGGCATCAAAGGAAAACCAGGTGTTTCTTCTTCAGGGTCTTCCCATGGACTCAATCACAAAGGGTGGAATCAATTGGTTCTTCATCGTTTCAAAGTTATAAAGCAGAAAATTAAACATGCTCTTGTGGAATTCGCAAAATATGGTGAGCTAGCTTCTATTGAAGCAGTTCACCACAGAGGTTCATCTGAATGTAGGCTCTCAAGTAATGAGAAAGAGGTGTCACAAAGTTTAGAGGACGGCGTGATTGAAGAGTATATAGAGAGTAGAAACTTACATGAGACTAAAGCTTCTGATTATGATTCCCACAGACATGAAGTTGGTCACATGAAAAGAACATCTTCTCTAAATGAATCACTGGATAAATACACTCAATTGTTTGAGCAAAGCTTCCGCAAAGACATGAAATGGCACAACTCAATGTCCAAAAGCTTAAAATTGATAAATGAGGATACGAATGAAATGAATGGGCACGCTCCAAAGTCGTCCAGAAGAAATTTGTCTCTGCCTAATCTTGACCCTCTGGACTTCCTTCTACAGGAGGCAATTCGTGATTCAAGTGATATGGGAATTCAAGAGAGAACTTCTGCGGAGAATGACACAAATGCTGAAGCTGATATTCTTGTTCAACGAAATTCTTCAGAGTCTGAAATTCAGGAAGTGGTGGATAGCAGTGACCGGGATGTGAATCCCAGTACTGTGGAGAAACATGAAAGGGAAGTTACAAGTGAAAATAGGGAGGACATACACAAGCCAGCAATGGGAGATGAAAAGGATGTATTGGCAGTTCTTGACACTAGCTGCGAGGACTGTGCAACTAGGCATGCAGAAGGTGCTGTAACAAATACTACAGGCTCTGGTTCGGATGAGTTGAATTCAAATGTTAATGCAACAGATAAAGGCGCAAACAAGTGCGGTGACAAACATTTCCTGCTTTTTGAATCAGATATAGAAAACGATTTTAATTTTAAATATGTGAAGGAGGTTATGGAATTTTCGGGCTTCATGGAGGAAAATGAACCTATGCAAATCTGGCACACAGACACAGTAGACAAGGTACTAAAGCCCTCCTCATTCAAGGAATTGGAGACTTGTTTGCACAGAGAAATGGAATGCTCAGAAGAAGAGAATATCAAGGTGTATGATCACCAACTTCTTTTTAATTTAGTGAAAGAGGTACTTCTGGAAATATACGACAGATCATCAACCTACTTCCCGAGATCCTTCTCCTTCAACCACCGCCTTCATCCAGTGCCTAAAGGGCACCATCTTCTGAAACAAGTCTGGACTAGAGTTGACTTGTACCTGACGTTGAAGCCAGAGCTAGATCAGACATTAGACGACGTTGTGTCTCGAGATTTTGCACATGGTGGCTGGATGAACCTCCAATGGGAGGAAGAGTGTATGGCACTCGAACTAGAAGACATGATTATGGAAGATCTGTTACATGAAGCTGTCTTCTCATGA 2349 0.4125 MGKHFLSSNQSPVHLQHNNPGCMWGIFHILDYHHWHNVKKVFPLKKRYRGRHARYGRKIILYNHVVGEDQQYEAAETEPLLVKQQSEKVSATGKRSPRRCKKESHTENRSVMEENTESWIFSFDAELQHFESSEKSVHSRQDQAAREYALFVEKDGKTTEAVLNQKHGDSSKLNRDISNKLNDRIDVLEVFRVEKDLLLKILQDLDIGEKSFKQPSNNKARLTKSGSFPLATSSQMRNIGSSSLNHKKNEVWAFPKREKLVTATRAKKIFASSFATFTSHNAKQMPLVTDHDVDRGIKGKPGVSSSGSSHGLNHKGWNQLVLHRFKVIKQKIKHALVEFAKYGELASIEAVHHRGSSECRLSSNEKEVSQSLEDGVIEEYIESRNLHETKASDYDSHRHEVGHMKRTSSLNESLDKYTQLFEQSFRKDMKWHNSMSKSLKLINEDTNEMNGHAPKSSRRNLSLPNLDPLDFLLQEAIRDSSDMGIQERTSAENDTNAEADILVQRNSSESEIQEVVDSSDRDVNPSTVEKHEREVTSENREDIHKPAMGDEKDVLAVLDTSCEDCATRHAEGAVTNTTGSGSDELNSNVNATDKGANKCGDKHFLLFESDIENDFNFKYVKEVMEFSGFMEENEPMQIWHTDTVDKVLKPSSFKELETCLHREMECSEEENIKVYDHQLLFNLVKEVLLEIYDRSSTYFPRSFSFNHRLHPVPKGHHLLKQVWTRVDLYLTLKPELDQTLDDVVSRDFAHGGWMNLQWEEECMALELEDMIMEDLLHEAVFS 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1204 782 MobiDBLite consensus disorder prediction 514 540 - -
Dere08g1204 782 MobiDBLite consensus disorder prediction 84 111 - -
Dere08g1204 782 MobiDBLite consensus disorder prediction 486 513 - -
Dere08g1204 782 MobiDBLite consensus disorder prediction 486 540 - -
Dere08g1204 782 PANTHER PROTEIN TRM32 1 782 IPR044257 -
Dere08g1204 782 Pfam Domain of unknown function (DUF4378) 617 778 IPR025486 -
Dere08g1204 782 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1204 Dere-ChrDere08 16183967 16187153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1204 185 772 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 28.808 5.20e-47 178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1204 08 16183967 16187153 Dere08g1204 08 16183967 16187153 ECH