Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1203 ATGACATTCAACGCTCTGCGAGGCAGCGCGTGGGATTTGCGCATGGCATCCCTGTCCGCGTGGTCCAGGTCCACCAAAGTAATGCGGATCTTGTCCACTTGCTATGGGGCGTGGATTCCACCCTCCTCAGGGAAGCTTTGGTATTTGCTTCGATTTGTTCGTTTTCCGATGGGTAACGGTATAGGCAAGCTAGCCGCGTGCTTCACTAGCCGCGGAGGCCATCGCCGGAAGCAGGATATATCCTATTTGATTGCTGAGCCTCTCGACGAAGGACACGGCCACTCCTTCTGCTACGTTCGACCTGACCCGACCCGTCTGTCTTCGTCCAAAGTCCACTCCGAGGAGACCACCACCTTCCGAACAATCTCAGGCGCATCTGTGAGTGCCAATACATCGACGCCTCTTTCCACAGCCTTCGTTGACTTGTACTCGTACGGCTGTATCGATAGAGCAGCAGCTTTCGAGAGTTCTACTTCTTTTGCGTCCCTTCCTCTGCAACCAATCCCTAAAAACCTCATGAATTCCGGTCCCTTCTCGGGAAATCTAGGTATGGTTCCCGGGTCGGGTCCGCTTGAAAGAGGCTTTATGTCGGGTCCTATAGAGCGTGGGTTTATGTCGGGTCCAATCGATCGTGGGTTGTTCTCGGGTCCCATGGAAAAGGATAGTTCCGATCAATTTCAGAGAAGCTTCTCTCATGGGGGTTTTGCCTTTAGACCGACAACGCGAAAGGGTCGATGGATTCAAGTTCTTCAGAGGGCTATTTCAAAGACGTTATCTCGGGGACAGAACTCGATTGTTGCTCCGATTAAAGGGATTAAAGAACCGGAGTGGATTATTGGACCGGAGAGGCACAACGAGAATCTGACGGTAAGTAGTGTGAATTTCAGCAGCGATGGTAGTCTGGAAGATGATGATTCAATGGAAAGTCAAAATCTTCAATGGGCTCAAGGTAAAGCGGGTGAGGACAGAGTCCACGTTGTGGTATCAGAGGAGCATGGTTGGGTTTTCGTAGGAATTTACGATGGTTTCAACGGTCCTGATGCTCCCGATTACCTTCTATCGAATTTGTACGGCGCTGTTCATAAAGAATTGAAGGGACTATTATGGGATGATGGGTTTGAATCCTCCTCCGCGGTCGCTGCCCCTGATGCCTCCGGCCATCCGCCGGCGAATTCCGATTTGGAAGTGGAAGATTCGTTACAGAGCAGTGATAATGATGTTGTAAAGGACAGAATGGTCGATGCTTGTTCTCAATGTGTTGAGCAAGAGAATCATGCGTATGCAAGTGGAGATGCGAATATTGATAAGAGAAAGCGAGGTAAGAATGGTAAGAGTAAGTACAGAGGGGCAGCGAAGAAATATGAGGAGAATCAGAGAAGGTGGAAGTGTGAATGGGATCGGGAAAGAGTAGAACTCGATAGAAGATTAAAGGAACAGTTAAATCGATCTGGGTCTGGTGGCAGTAGTAGCCCAATAAATCATTCAGATGTGTTGGAAGCTCTTTCAGAGGCTCTAAGAAAAACAGAGGAGTCTTATTTGGAAATTGCAGATAAGATGGTAATGGAAAATCCTGAGCTAGCTCTGATGGGTTCATGTGTTCTTGCAATGTTGATGAAAGGGGAGGATGTTTATGTGATGAACGTAGGCGATAGTAGAGCTGTACTGGGTCAAAAGGCAGAGCCTGATTATTGGATTGGGAAAATCAGGCAGGACTTGGAGAGGATCAATGAAGAAACAATGCATGATCTTGAATCATTAGATGGTGATAGATCAAATTTGGTCCCTAGTCTAAGTGCGCTTCAGTTAACGAAGGATCACAGTACCAATGTTGAGGAAGAAGTCCAGAGAATCAAGAAAGAACACCCAGATGATGCTTGTGCACTGCTAAATGATCGTGTTAAGGGTTCTCTGAAGGTGACCCGAGCATTTGGTGCCGGCTTTCTCAAACAGCCAAAGTGGAACAATGCACTTCTGGAGATGTTCAGAATAGACTATGTAGGAACTTCTCCTTACATCACCTGCCTGCCATACCTAAAGCACCACAGATTAGGCCCAAAGGACAAATTTTTGATACTTTCTTCCGATGGGCTTTATCAATACTTGACGAACGAAGAAGCTGTAGCTGAAGTTGAGCTTTTCATCACTTTGCAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTTCTATTTCGTGCTGCAAAGAAAGCTGGTCTGGACTTTCACGAGTTGCTGGAAATACCACAGGGTGATAGGCGTCGTTACCATGATGATGTTTCTATCATTGTGATTTCTTTGGAGGGAAGGATATGGAGATCATGTGTATAA 2331 0.4715 MTFNALRGSAWDLRMASLSAWSRSTKVMRILSTCYGAWIPPSSGKLWYLLRFVRFPMGNGIGKLAACFTSRGGHRRKQDISYLIAEPLDEGHGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPKNLMNSGPFSGNLGMVPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPMEKDSSDQFQRSFSHGGFAFRPTTRKGRWIQVLQRAISKTLSRGQNSIVAPIKGIKEPEWIIGPERHNENLTVSSVNFSSDGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYGAVHKELKGLLWDDGFESSSAVAAPDASGHPPANSDLEVEDSLQSSDNDVVKDRMVDACSQCVEQENHAYASGDANIDKRKRGKNGKSKYRGAAKKYEENQRRWKCEWDRERVELDRRLKEQLNRSGSGGSSSPINHSDVLEALSEALRKTEESYLEIADKMVMENPELALMGSCVLAMLMKGEDVYVMNVGDSRAVLGQKAEPDYWIGKIRQDLERINEETMHDLESLDGDRSNLVPSLSALQLTKDHSTNVEEEVQRIKKEHPDDACALLNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGTSPYITCLPYLKHHRLGPKDKFLILSSDGLYQYLTNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1203 776 SMART PP2C_4 305 765 IPR001932 -
Dere08g1203 776 Pfam Protein phosphatase 2C 496 723 IPR001932 -
Dere08g1203 776 SUPERFAMILY PP2C-like 318 768 IPR036457 -
Dere08g1203 776 MobiDBLite consensus disorder prediction 377 403 - -
Dere08g1203 776 Coils Coil 600 620 - -
Dere08g1203 776 ProSiteProfiles PPM-type phosphatase domain profile. 304 767 IPR001932 -
Dere08g1203 776 CDD PP2Cc 472 767 IPR001932 -
Dere08g1203 776 Coils Coil 498 518 - -
Dere08g1203 776 Gene3D - 282 772 IPR036457 -
Dere08g1203 776 PANTHER PROTEIN PHOSPHATASE 2C 302 765 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1203 Dere-ChrDere08 16161219 16164486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1203 57 776 PP2C-type Phosphatase Gene Family AT1G07630 67.575 0.0 950