Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1192 ATGGCGAAGACACTAATTTCGTCTCCGTCATTTTTCCGCACACCACTCCCTTCACTACCCGGCCATGGAGTGCGCACCTTCCCTCATCGGACGCTAGTCACCACAAGAGTTAAATTCTGCTTCCACGAAACTTCCCCAATTCAATCTATTGCTTATCCGATTGACTTCAACCATATTGTTAATAGAGCCGAAGGCCTTCTTTACACCCTTGCTGACGCCACGGTCGCAGCGGATTCAGGTGCTGCTGCTGCTGCTGCTTCGAGCTCCACAGATGCTGCTGTACAGAAGAACGGAGGGTGGTTTGGTTTTATCTCCGAAGGAATGGAATTTGTTCTCAAGGTGTTAAAGGATGGCCTTAGCGCTGTGCATGTACCTTACTCATACGGATTTGCCATAATATTGCTCACTGTTGTTGTTAAAGTTGCTACACTTCCCTTGACTAAGCAACAGGTCGAATCAACACTTGCTATGCAAAATCTTCAACCTAAAATTAAGGCCATTCAAGAAAGATATGCTGGCAATCAGGAAAGAATTCAACTTGAGACGTCAAGGCTATACAGGCAGGCTGGGGTTAACCCATTGGCTGGATGTTTACCAACTTTGGCAACAATTCCAGTCTGGATAGGTCTCTACCAAGCTTTATCAAATGTGGCAAATGAGGGATTGTTAACAGAAGGTTTCTTTTGGATTCCCTCTTTGGGTGGTCCTACAACCATTGCTGCCCGACAAAGTGGATCTGGAATTTCTTGGCTTTTCCCATTTGTGGATGGCCATCCACCATTGGGTTGGCATGACACAGCTGCATATCTCGTTTTACCTATCCTTCTTGTTGTTTCTCAATACGTTTCAATGGAAATCATGAAACCTCCTCAGACCAACGATCCAGCTCAAAAGAATACACTCCTTGTTTTCAAGTTCCTTCCAATCTTGATTGGTTACTTCTCGCTGTCTGTCCCATCAGGACTAACAATTTACTGGTTTACGAACAATGTCCTGAGCACAGCCCAACAAGTATGGTTGCGCAAATTAGGAGGTGCAAAGCCTGTCGTGAATGAAAATTCAGGTGAAATTATTACTGCTGGACGTGCTAAACGATCAGTCTCTCAGCCAGCAAGAGCTGGTGAAAGGTTTAGGCAGTTCAAAGAAGAGGAAAAGAAGAGGAAATTAAGCAAGGATCTGCCAGTGGAAGAGGTTCAACCTCTGGCTTCTGCTTCTGTTTCCAGGGATGGTTCAGACGAAGAAAGTGATGACAAGGATCAGGAAGTGGCGGAAGAAGCATATGCTTCTAGAGTTAGCAAAGAGGATTTGAATTATTCTAGACAAAAAAGAAGCAAGCGCTCAAAGCGGAAGCGTAGTGTATAA 1362 0.4486 MAKTLISSPSFFRTPLPSLPGHGVRTFPHRTLVTTRVKFCFHETSPIQSIAYPIDFNHIVNRAEGLLYTLADATVAADSGAAAAAASSSTDAAVQKNGGWFGFISEGMEFVLKVLKDGLSAVHVPYSYGFAIILLTVVVKVATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWHDTAAYLVLPILLVVSQYVSMEIMKPPQTNDPAQKNTLLVFKFLPILIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKLGGAKPVVNENSGEIITAGRAKRSVSQPARAGERFRQFKEEEKKRKLSKDLPVEEVQPLASASVSRDGSDEESDDKDQEVAEEAYASRVSKEDLNYSRQKRSKRSKRKRSV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1192 453 MobiDBLite consensus disorder prediction 369 394 - -
Dere08g1192 453 CDD 5TM_YidC_Alb3 129 342 IPR047196 -
Dere08g1192 453 MobiDBLite consensus disorder prediction 361 453 - -
Dere08g1192 453 Pfam 60Kd inner membrane protein 128 342 IPR028055 -
Dere08g1192 453 MobiDBLite consensus disorder prediction 422 441 - -
Dere08g1192 453 PANTHER OXA1 72 387 IPR001708 GO:0016020|GO:0032977
Dere08g1192 453 NCBIfam membrane protein insertase YidC 127 341 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1192 Dere-ChrDere08 16071031 16075081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1192 21 398 Chloroplast and Mitochondria Gene Families AT2G28800 65.974 5.20e-180 508