Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1174 ATGCCGATCTCTAGAATTGCGGTCGGAAATGCGTCTGAGTTCGGTCAAGCCGATGCTCTGAAGGCCGCCCTGGCTGAGTTCATCTCAATGCTCATCTTTGTCTTTGCAGGCGAAGGCTCCGGCATGGCTTTCAATAAGCTCACAAACAATGGTTCAGCAACACCAGCTGGGCTGGTGTCAGCATCAATAGCTCATGCCTTTGCACTGTTTGTGGCGGTCTCTGTTGGTGCTAACATTTCTGGTGGTCACGTGAATCCCGCTGTTACCTTCGGTGCTTTTGTTGGTGGTCACATTAGCCTCCTCAGAAGTATTTTGTACTGGATTGCCCAGTTGCTTGGTTCTGTGGTTGCTTGCTTGCTCCTTAAATTTGCCACTGGTGGACTGGAAACATCAGCATTCGCACTGTCCGAAGGGGTGGGTGCATGGAACGCAGTCGTTTTTGAGATCGTGATGACTTTTGGTTTGGTTTACACAGTGTATGCGACGGCGGTGGACCCAAAGAAGGGTGACATAGGGATAATAGCTCCGATAGCAATTGGCTTCATTGTGGGTGCTAACATCTTGGCCGGTGGTGCCTTCGACGGTGCGTCTATGAACCCAGCAGTGTCGTTTGGGCCCGCTGTGGTTAGCTGGACTTGGGCCAACCACTGGGTCTACTGGCTCGGCCCATTCGTTGGTGCAGCCATTGCTGCTCTTGTCTATGAAATTTTGTTCATCAACCAGAACACCCACGAACAGCTCCCCACCACAGATTATTAG 759 0.5138 MPISRIAVGNASEFGQADALKAALAEFISMLIFVFAGEGSGMAFNKLTNNGSATPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHISLLRSILYWIAQLLGSVVACLLLKFATGGLETSAFALSEGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWLGPFVGAAIAALVYEILFINQNTHEQLPTTDY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1174 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1174 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1174 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1174 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1174 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1174 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1174 252 PANTHER AQUAPORIN-8 6 247 IPR034294 -
Dere08g1174 252 SUPERFAMILY Aquaporin-like 18 244 IPR023271 -
Dere08g1174 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere08g1174 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Dere08g1174 252 FunFam Probable aquaporin TIP1-1 4 252 - -
Dere08g1174 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Dere08g1174 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1174 Dere-ChrDere08 15922020 15923620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1174 1 252 Major Intrinsic Protein MIP AT4G01470 78.175 1.96e-144 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1174 08 15922020 15923620 Dere07g0932 07 12930039 12931318 CCT