Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1163 ATGGCTCCTTGGCCGCGGCTCCCGATCATCGGCCACTTGCACCTCCTTGGTCCCCTCGTCCACCAGACTCTCCACCACCTCTCCCTCCGATATGGTCCATTCTTCTCTCTTCACTTGGGCTCTGTGCCATGCGTCGTCGTTTCCAATCCCCACTTTGCTAAGTTGTTTCTTCAGGACAACGAGCTCTCCTTCAGCTCACGGCTTGAATCCACCGCCATCAAACGCCTCACTTACGAGTCCTCTTTGGCTTTCTCACCCTACGGACCCTACTGGAAGTTCATCAAGAAGCTAAGCTTCAATGAGCTCTTCGGCTCTCGAGGCACCGGCAAGTTCACGAACTTGCGGACTCAGGAGTACGATAAGCTTCTAGGGCTTATAGCCCAGAGAGCCAGGGCTTGCGAGCCCGTGAATATCACGGAGGAGCTGCTCAAGTTGACGAACACTGTGATTTCGAAGATGATGATCGGAGAATCAGAGGAGGCGAGGGACGTGATACGCGAGGTGACGAAGATGTTCGGGGAGTTTAACGTTGCAGACTTTGTTGGGGTGTTGAGGAAAGTGGACTTGCAAGGGTTTGGGAAGAGAATAGAGGATCTGCATCAGAGGTTTGATTCCTTGGTGGACAGGATTATTACTAAACGCGAGCAAGCGAGGAAGACTAGGAAGATGCAAAGCGGAGAAGGTGACTTCAGGGATTTTCTTGATATCTTGCTTGATATTGCGGAGGATGAAAGCTCGGAGATGAAAATTACCAGGGTTCACATGAAAGGCCTAGTCATGAACACAGTGCTTATTGTTAATGTCCGGCCTGAAAGATTCTTGAAGCCCATAGAAGGGAGCTCATCCACGGGCTTTCTTGATGTGAGAGGACAACATTTTCAGTTTCTGCCATTTGGGACTGGAAGGAGGATGTGCTCTGGTCTCACTTTAGCCATGCAGGAGGTGCCTGCTGTAGTAGCTGCCCTCATTCAGTGCTTTGATTTTGAAGTGGTGGGCCCTCAGGGACAGACTTTGAAGGCTGAAAAAGCTTTGATTGATATGGATGAGAGGCCTGGTTTGACAGTTCCACGAGCCCATGAACTAGTGAGTACTGATTGTTTGATGTTTTCTGAATGGAAGAGTACTTATTGTTCGATTTATTCTGAATGGAAGACGTCCAACTTAGGGGTTCATTTCAACCCTACTCCACCTCACCTAGCCAAGAGGACATGGTTGCCATGTCATCGTCCAGTATTTGTTTCCATGTCAGCTCCGTCTCCTATGTCTGCAACTTCTTAG 1278 0.4945 MAPWPRLPIIGHLHLLGPLVHQTLHHLSLRYGPFFSLHLGSVPCVVVSNPHFAKLFLQDNELSFSSRLESTAIKRLTYESSLAFSPYGPYWKFIKKLSFNELFGSRGTGKFTNLRTQEYDKLLGLIAQRARACEPVNITEELLKLTNTVISKMMIGESEEARDVIREVTKMFGEFNVADFVGVLRKVDLQGFGKRIEDLHQRFDSLVDRIITKREQARKTRKMQSGEGDFRDFLDILLDIAEDESSEMKITRVHMKGLVMNTVLIVNVRPERFLKPIEGSSSTGFLDVRGQHFQFLPFGTGRRMCSGLTLAMQEVPAVVAALIQCFDFEVVGPQGQTLKAEKALIDMDERPGLTVPRAHELVSTDCLMFSEWKSTYCSIYSEWKTSNLGVHFNPTPPHLAKRTWLPCHRPVFVSMSAPSPMSATS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1163 425 Gene3D Cytochrome P450 1 265 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g1163 425 PRINTS E-class P450 group I signature 28 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g1163 425 PRINTS E-class P450 group I signature 145 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g1163 425 Gene3D Cytochrome P450 268 361 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g1163 425 PANTHER CYTOCHROME P450 93A3-LIKE 269 363 - -
Dere08g1163 425 SUPERFAMILY Cytochrome P450 3 359 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g1163 425 Pfam Cytochrome P450 2 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g1163 425 Pfam Cytochrome P450 269 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1163 Dere-ChrDere08 15629603 15634007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1163 269 362 Cytochrome P450 AT5G06900 37.234 2.80e-09 57.0