Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1160 ATGCCCAAAAAAGGAATGAGAAGCATCTTCTTCAAACTTTCTTCTCCTTCACCCCCTTCACCGGTGTCCATGCCACCATCTTCCCCTCACCGAACGTTCTCAGACTCGCTGATTGATGAGAACATTGAGAATGCTCGCTTTCTCATCACCAAATGGGACTCTAACCAGTCTTCCACCACCGGAATTACCACTCTTTTCTACGGCAACCGCCAAGAAGCCAGACAGTACCTTAATGCCGTCAGGGACTTGCAATCCGCCATGCGGTATCTTGTCGCACAGGATTCCACCTCCGAAAAGCTCGTTCACGCTCACCTCTTGATGCAGGTTGCGTTTACGAGGCTCGAGAAGGAGTTCTATCAGATATTGTCCTCCAACAGAGATCATTTGGATCCCGAGACCATTTCCAATCGTTCCTCCGTCGATCGGAGAAGCAGCGTTTCCGATTTTGACGACGATTTCTCCGAGGACGAGCCTTGTTCTGCGGCTGGTAATTCCATTTCTGAGACGGAGAGAGTATCTATGGTTGCCATGGGGGATTTGAAAGCCATTGCGGAATGCATGATTTCAATTGGTTATGGCAGAGAGTGCATCAAGATTTACAAACTCATGAGAAAATCAATTGTCGATGAGGCTATGTACCATCTCGGAGTGGAGAGGCTGAGCTTCTCTCAGGTCCAGAAGGTGGATTGGGAGGTGATCGAGTTGAAGATTAAGAACTGGTTGAACGCCATCAAGGTCGCGGTCACAACTCTGTTTTACGGAGAGAGAATTCTCTGCGACCACGTCTTCGCCACTTCGGAGAAAATCGCCGAGTCCTGTTTCGCCGAGATTTGCAAAGAGGCTGCTATGTTGCTGTTTGGATTCCCGGAACTCGTTGCAAAATACAAGAAAACGCCCGAGAAAATGTTCATGACTCTGGACTTGTACGAAGCAATCACCGATAATTGGCCACAAATTGAGTCCATCTTCTCATTCGAGTCAACCTCCGCCATCCTGTTACAGGCCGTCAATTCCATGGCCAAGCTCGGTGACGCCGTTCGGACAATGCTCACCGACTTCGAATCGGCGATTCAGAAGGACATCTCCAAGAAGCCAGTGCCAGGTGGCGGAGTCCACCCCCTGACGCGCTATGTCATGAACTTTATCTCACTCCTCGCCGATTACAGTGGTGTACTCGCCGACATAGTCGCCGATTGGCCGCTAACGTTGCAATCTCCGTTGCCAGAGTCTTACTTCCCAAGTCCAAACAACGATGATAACCCCTCGTCAGAAATATCGGTGAGACTTGCGTGGCTAATACTCGTTCTCCTCTGCAAACTCGACAAGAAAGCCGAGCTATACAACGACGTCGCACTTTCCTACCTCTTCCTCGCCAATAACCTCCAATACGTCGTCGTTAAGGTGCGCAAATCCAATCTAAGCTTCCTCCTTGGCGAGAATTGGTTGATAAAGCACGAATCAAAGGTCAAAGAGTATGTGTCCAAGTACGAACGCATGGGTTGGAGCAAAGTTTTTTCGTCACTTCCTGAAAAGCCGACGGCGGAGATGCCGACGGAGCAAGCCAGAGCGTGCGTCAGGAATTTCATCGCCGAATTCAGTGAGGCGTGCAAGAAGCAATCCTCGTGGATCGTATCGGACTCCAAACTGCGAGACGAAATCAAAGGTTCGATATCGTCGAAGCTGGTACCGAGATACCTGGAATTTTACGAGGCTCATCGGGTCGAGTTGAGAAGAGAGTTCGGGTCGATGTCGGGTCTGAGGCTTTCACCCGATAATTTAACGAATTACCTGTCTGACATTTTGTATGGGAACGGAGATTCGAGCAGCGTTTCGTCCCATTCTTCGTCGTCTTCTCATCGCTCCAATCGTTCTTGA 1875 0.4965 MPKKGMRSIFFKLSSPSPPSPVSMPPSSPHRTFSDSLIDENIENARFLITKWDSNQSSTTGITTLFYGNRQEARQYLNAVRDLQSAMRYLVAQDSTSEKLVHAHLLMQVAFTRLEKEFYQILSSNRDHLDPETISNRSSVDRRSSVSDFDDDFSEDEPCSAAGNSISETERVSMVAMGDLKAIAECMISIGYGRECIKIYKLMRKSIVDEAMYHLGVERLSFSQVQKVDWEVIELKIKNWLNAIKVAVTTLFYGERILCDHVFATSEKIAESCFAEICKEAAMLLFGFPELVAKYKKTPEKMFMTLDLYEAITDNWPQIESIFSFESTSAILLQAVNSMAKLGDAVRTMLTDFESAIQKDISKKPVPGGGVHPLTRYVMNFISLLADYSGVLADIVADWPLTLQSPLPESYFPSPNNDDNPSSEISVRLAWLILVLLCKLDKKAELYNDVALSYLFLANNLQYVVVKVRKSNLSFLLGENWLIKHESKVKEYVSKYERMGWSKVFSSLPEKPTAEMPTEQARACVRNFIAEFSEACKKQSSWIVSDSKLRDEIKGSISSKLVPRYLEFYEAHRVELRREFGSMSGLRLSPDNLTNYLSDILYGNGDSSSVSSHSSSSSHRSNRS 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1160 624 FunFam Exocyst subunit Exo70 family protein 59 609 - -
Dere08g1160 624 Pfam Exo70 exocyst complex subunit 238 599 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dere08g1160 624 MobiDBLite consensus disorder prediction 133 157 - -
Dere08g1160 624 MobiDBLite consensus disorder prediction 1 32 - -
Dere08g1160 624 SUPERFAMILY Cullin repeat-like 70 600 IPR016159 -
Dere08g1160 624 Gene3D Exocyst complex component Exo70 49 610 - -
Dere08g1160 624 PANTHER EXOCYST COMPLEX PROTEIN EXO70 32 594 IPR004140 GO:0000145|GO:0006887
Dere08g1160 624 MobiDBLite consensus disorder prediction 133 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1160 Dere-ChrDere08 15600002 15601876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1160 4 604 EXO70 exocyst subunit family AT2G39380 49.180 0.0 577